Re: [caret-users] blacking out subcortical regions

2014-11-10 Thread Donna Dierker
There is a paint file that comes with many of the PALS-B12 datasets (e.g., Sept 
2006 tutorial) that has a medial wall column.  Use that as the primary overlay 
with your metric or other overlay as the secondary overlay.  This grays out the 
medial wall.


On Nov 9, 2014, at 10:43 AM, Frédéric Roux f.r...@bcbl.eu wrote:

 Hi there,
 
 I've finally managed to get to visualize my MEG source-reconstruction data 
 using caret !!!
 So far I am very satisfied with the way everything looks.
 
 The only thing that's missing is a way to black out the sub-cortical areas? 
 I've seen
 people do this regularly in their publications and I would like to do the 
 same as from
 what I understand the PALS-B12 surface is only meant for cortical 
 representations?
 
 I could basically try to null all the values which lie below a certain 
 coordinate of
 the Z-axis in my data, but I was wondering if there is a simple and easier 
 way to do
 it in in Caret.
 
 Any help or suggestions would be highly appreciated.
 
 Thanks.
 
 Fred
 ---
 
 
 ___
 caret-users mailing list
 caret-users@brainvis.wustl.edu
 http://brainvis.wustl.edu/mailman/listinfo/caret-users


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Re: [caret-users] blacking out subcortical regions

2014-11-10 Thread Frédéric Roux
thanks Donna!

Frédéric Roux

- Original Message -
From: Donna Dierker do...@brainvis.wustl.edu
To: SureFit Caret, and SuMS software users caret-users@brainvis.wustl.edu
Sent: Monday, November 10, 2014 4:52:53 PM
Subject: Re: [caret-users] blacking out subcortical regions

There is a paint file that comes with many of the PALS-B12 datasets (e.g., Sept 
2006 tutorial) that has a medial wall column.  Use that as the primary overlay 
with your metric or other overlay as the secondary overlay.  This grays out the 
medial wall.


On Nov 9, 2014, at 10:43 AM, Frédéric Roux f.r...@bcbl.eu wrote:

 Hi there,
 
 I've finally managed to get to visualize my MEG source-reconstruction data 
 using caret !!!
 So far I am very satisfied with the way everything looks.
 
 The only thing that's missing is a way to black out the sub-cortical areas? 
 I've seen
 people do this regularly in their publications and I would like to do the 
 same as from
 what I understand the PALS-B12 surface is only meant for cortical 
 representations?
 
 I could basically try to null all the values which lie below a certain 
 coordinate of
 the Z-axis in my data, but I was wondering if there is a simple and easier 
 way to do
 it in in Caret.
 
 Any help or suggestions would be highly appreciated.
 
 Thanks.
 
 Fred
 ---
 
 
 ___
 caret-users mailing list
 caret-users@brainvis.wustl.edu
 http://brainvis.wustl.edu/mailman/listinfo/caret-users


___
caret-users mailing list
caret-users@brainvis.wustl.edu
http://brainvis.wustl.edu/mailman/listinfo/caret-users

___
caret-users mailing list
caret-users@brainvis.wustl.edu
http://brainvis.wustl.edu/mailman/listinfo/caret-users