[ccp4bb] Regarding BMCD

2009-06-12 Thread Nishant Varshney
Dear all, I have bee trying to access the biomolecular crystallization database BMCD for quite sometime now, no matter which route I access it through the page shows an error as the server can not be contacted. I would like to know whether its a problem only I am coming across.Moreover, is

Re: [ccp4bb] Regarding BMCD

2009-06-12 Thread David Cobessi
Have you tried: http://xpdb.nist.gov:8060/BMCD4/index.faces It works for me. David Nishant Varshney wrote: Dear all, I have bee trying to access the biomolecular crystallization database BMCD for quite sometime now, no matter which route I access it through the page shows an error as the

Re: [ccp4bb] Regarding BMCD

2009-06-12 Thread jai mohan
Dear Nishant, You may follw this link below, after you indicate the protein/enzyme/nucleic acid name don't hit ENTER [probably it wont work] CLICK submit. http://xpdb.nist.gov:8060/BMCD4/index.faces;jsessionid=b196fdf1b356c8293b85a9f3981d   jaimohan --- On Fri, 12/6/09, Nishant Varshney

[ccp4bb] crystool

2009-06-12 Thread Clemens Grimm
Dear all, is the Rupp Segelke CRYSTOOL still accessible somewhere? The old link http://www-structure.llnl.gov/crystool/crystool.htm seems not to work anymore. Or are there alternatives? Thanks Clemens

Re: [ccp4bb] crystool

2009-06-12 Thread Brent Segelke
Unfortunately, due to licensing issues and onerous rules here about hosting dynamic content it has become very difficult for me to keep CrysTool available to the public. Expressed interest in CrysTool does help me to press the case. I am hopeful that licensing issues can be worked out, if so,

Re: [ccp4bb] mtz2various is broken [ was: Another pointless question ]

2009-06-12 Thread Martyn Winn
Apologies, have been away. I hope I have extracted the relevant points from this thread. For the record, the CCP4 library also uses the symops to determine the spacegroup, when it can. Hence the observation below that mtzdmp and refmac find the right spacegroup. However there are plenty of cases

Re: [ccp4bb] mtz2various is broken [ was: Another pointless question ]

2009-06-12 Thread Ian Tickle
Hi Martyn Since seeing Ethan's last posting I guessed immediately, following on from what Kevin had said earlier, that the program in Ethan's sequence which made the change from SG #4005 to #5 in the MTZ header (and my tests confirm this) is ctruncate; this behaviour presumably is a feature of

Re: [ccp4bb] mtz2various is broken [ was: Another pointless question ]

2009-06-12 Thread Winn, MD (Martyn)
I didn't mean to commit to a particular solution. That wouldn't be wise on a Friday night with jet lag ;) As an internal call in mtz2various, it should use symops ... but I need to check that this works. Spacegroup number vs name is an issue for the user interface (graphical or otherwise). We

Re: [ccp4bb] Regarding BMCD

2009-06-12 Thread Edward A. Berry
That seems likely. I also can't reach the BMCD link, but I can reach the same host on port 80. I understand my institution has a very restrictive firewall, due to being associated with a hospital with lots of medical records and other personal information. Ed Manish Chandra Pathak wrote: It is