Post-Doc Position: Structure-aided redesigning of an enzyme: molecular biology,
protein expression/purification crystallography
Immediate opening, in the Sussman lab at the Weizmann Institute of Science,
for a postdoctoral fellow with experience in cloning and in protein expression,
The 'table 1' is a noun
To 'table 1' is a verb
Why not to develop our language farther..
Felix indeed completely tabled me here. I start to realize now the
inadequacy and incompleteness of my epistemological demonization of Table 1.
Felix' linguistic deconstruction of T(t)able on fact adds
Hi Bernhard,
snip
But the real objective is – where do data stop making an improvement to the
model. The categorical statement that all data is good
is simply not true in practice. It is probably specific to each data set
refinement, and as long as we do not always run paired refinement
Dear colleagues,
This is just a reminder about our next webinar on the coming Wednesday,
September 4th. Allan D'Arcy will give an exciting presentation on Nucleation
and seeding in protein crystallization. If you have not registered to the
webinar, this is a good time to do so. We are looking
Dear all,
we are trying to superimpose several structures together with their electron
density to show the presence of point mutations. Is there any possibility to
superimpose the electron density together with its structure or to
translate/rotate the electron density alone?
Thanks you,
Hi Jan!
Phenix can do that - have a look here:
http://www.phenix-online.org/documentation/superpose_maps.htm
Best,
Matthias
Date: Thu, 29 Aug 2013 17:17:36 +0200
From: lohoefener@mh-hannover.de
Subject: [ccp4bb] Superposition of electron density
To: CCP4BB@JISCMAIL.AC.UK
Dear all,
Dear Jan,
You can also do this with PyMOL using matrix copy. You need to align the
pdb files first and then you copy its matrix and apply it to the electron
density.
http://www.pymolwiki.org/index.php/Matrix_Copy
Cheers,
Hugo
2013/8/29 Jan Lohöfener lohoefener@mh-hannover.de
Dear all,
Hi
You can use Chimera.
http://www.cgl.ucsf.edu/chimera/
Best
Dr. Anindito Sen
Graduate School of Medicine
University of Tokyo
Sent from my iPad
On 2013/08/30, at 午前12:17, Jan Lohöfener lohoefener@mh-hannover.de wrote:
Dear all,
we are trying to superimpose several structures
Hi Jan,
If there's no other easy solution at hand, you can consider using PyMOL. In
PyMOL you just load your structures and maps, align the structures, and
then move the maps with the matrix_copy command:
# Fetch two proteins and their densities
fetch 1oky 1t46, async=0
fetch 1oky 1t46,
