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Dear Oliver,
sorry for the trouble!
A default should be correct in the majority of situations, but it's impossible
to have it work for _all_ situations. The XDS default for REFINE(IDXREF) was
changed (i.e. POSITION was removed) to improve the indexing for weak and lousy
data, _and_ because the
> I am new to building into an EM map, and I wonder if I could get a
> recommendation for some standard routine for programs to use. I tried "find
> helixes and strands" tool in phenix, it found some secondary structure
> elements, however, it seems that there is more that could be done
>
Hello,
I am new to building into an EM map, and I wonder if I could get a
recommendation for some standard routine for programs to use. I tried "find
helixes and strands" tool in phenix, it found some secondary structure
elements, however, it seems that there is more that could be done
Dear CCp4bb
Perhaps someone has already done this and can help.
Does anyone have a script to take the Per-residue ASA & ratio to calculated GXG
value that is output from areaimol and give a list of residues greater than a
particular cutoff (>25%)
Best
Trevor
Dear all,
After upgrading XDS from build date 20170601 to 20171218, I am experiencing
severe degradation of apparent data quality reported by CORRECT for certain
data sets. Following first indications of issues with a slightly problematic
candidate, I went back to a previously very