[ccp4bb] Exciting Opportunity at Cedars-Sinai's Inflammatory Bowel and Immunobiology Research Institute (IBIRI), Los Angeles, CA for a Research Specialist II Position

2018-01-23 Thread Velasco, Christy
[oren:1WORK:Logo_Art:FW IBIRI Logos 3_7_14:Widjaja-IBIR_Vert_4C.eps] The Cedars -Sinai F. Widjaja Foundation Inflammatory Bowel and Immunobiology Research Institute (IBIRI) is searching for a highly motivated Research Specialist II to be part of Cedars-Sinai's commitment to Precision Health

Re: [ccp4bb] Issues with latest XDS (20171218)

2018-01-23 Thread Kay Diederichs
Dear Oliver, sorry for the trouble! A default should be correct in the majority of situations, but it's impossible to have it work for _all_ situations. The XDS default for REFINE(IDXREF) was changed (i.e. POSITION was removed) to improve the indexing for weak and lousy data, _and_ because the

Re: [ccp4bb] building into EM map

2018-01-23 Thread Pavel Afonine
> I am new to building into an EM map, and I wonder if I could get a > recommendation for some standard routine for programs to use. I tried "find > helixes and strands" tool in phenix, it found some secondary structure > elements, however, it seems that there is more that could be done >

[ccp4bb] building into EM map

2018-01-23 Thread Natalia O
Hello, I am new to building into an EM map, and I wonder if I could get a recommendation for some standard routine for programs to use. I tried "find helixes and strands" tool in phenix, it found some secondary structure elements, however, it seems that there is more that could be done

[ccp4bb] areaimol

2018-01-23 Thread Huyton, Trevor
Dear CCp4bb Perhaps someone has already done this and can help. Does anyone have a script to take the Per-residue ASA & ratio to calculated GXG value that is output from areaimol and give a list of residues greater than a particular cutoff (>25%) Best Trevor

[ccp4bb] Issues with latest XDS (20171218)

2018-01-23 Thread Weiergräber, Oliver H.
Dear all, After upgrading XDS from build date 20170601 to 20171218, I am experiencing severe degradation of apparent data quality reported by CORRECT for certain data sets. Following first indications of issues with a slightly problematic candidate, I went back to a previously very