Re: [ccp4bb] Regarding File conversion

Thank You so much for your help and guidance. On Tue, Apr 19, 2022 at 8:22 PM Marcin Wojdyr wrote: > Plenty of options. I'll add one maintained by me. Type: > gemmi convert file.cif file.pdb > or use it here: > https://project-gemmi.github.io/wasm/convert/cif2pdb.html > > > Marcin > > On Tue,

[ccp4bb] Postdoc Position at the Department of Biochemistry and Redox Biology Center, the University of Nebraska-Lincoln

Dear all, Our group has an opening for several research opportunities. Please see the details below. Thanks for your time! Limei Zhang Associate Professor Department of Biochemistry/Redox Biology Center University of Nebraska-Lincoln Email: limei.zh...@unl.edu http://biochem.unl.edu/limei-zhang

[ccp4bb] Normalizing Tomograms.

Dear All, Could someone please suggest to me the best way to normalize a tomogram? Thank you in advance. Sincerely, Gurudatt To unsubscribe from the CCP4BB list, click the following link:

Re: [ccp4bb] Regarding File conversion

Hi, Phenix has a collection of tools like this: phenix.cif_as_mtz phenix.cif_as_pdb phenix.pdb_as_cif phenix.mtz_as_cif Pavel On Tue, Apr 19, 2022 at 7:52 AM Marcin Wojdyr wrote: > Plenty of options. I'll add one maintained by me. Type: > gemmi convert file.cif file.pdb > or use it here: >

[ccp4bb] Postdoctoral position in collaboration with Bicycle Therapeutics

A postdoctoral position in our group at the Department of Biochemistry in Cambridge (UK) to use crystallography and biophysics to study the mechanism of inhibition by bicyclic peptide inhibitors developed at Bicycle Therapeutics. Great opportunity to work at the academia/industry interface for

Re: [ccp4bb] Regarding File conversion

Plenty of options. I'll add one maintained by me. Type: gemmi convert file.cif file.pdb or use it here: https://project-gemmi.github.io/wasm/convert/cif2pdb.html Marcin On Tue, Apr 19, 2022 at 2:01 PM Abhilasha Thakur wrote: > > Hello!! > Greeting of the day, > > I want to know regarding file

Re: [ccp4bb] Regarding File conversion

cif2pdb will do the trick if conversion is all you need. I use mmCQL to first rename 'chains' before converting. For both see: https://github.com/PDB-REDO/cif-tools Cheers, Robbie > -Original Message- > From: CCP4 bulletin board On Behalf Of Frederic > Vellieux > Sent: Tuesday, April

[ccp4bb] Reminder: Postdoc position at Imperial College, London

Dear all, A postdoctoral position is available in the lab focussed on understanding the role and mechanism of ESCRT-III-like membrane remodelling proteins in bacteria (for example https://pubmed.ncbi.nlm.nih.gov/34166615/). Core techniques will include cryoEM SPA and tomography. The position is

Re: [ccp4bb] Regarding File conversion

Hi, Last time I needed to do this the most convenient for me was to use Coot, with a very large coordinate file. Coot pre v1 (v0 something) to read in coordinates in the mmcif format and write out coordinates in the PDB format. HTH, Fred. On 2022-04-19 14:01, Abhilasha Thakur wrote:

[ccp4bb] Regarding File conversion

Hello!! Greeting of the day, I want to know regarding file conversion from *mcif file format *to *PDB format of proteins.* Is there any program or software that can be used to change one format to another format. KIndly guide me about programs used for file conversion or any other medium like

[ccp4bb] CCP4/CCP-EM workshop at ECM33

Dear All Following on for the CSD workshop e-mail there will be a joint CCP4/CCP-EM event at ECM33 https://www.ecm33.fr/copie-de-mechanical-properties Date : 21 & 22 August 2022 Venue : Synchrotron SOLEIL Organizer : Charles BALLARD

[ccp4bb] CSD workshop in Versailles

Dear all, Please find attached a message concerning a satellite workshop during ECM33, of great interest to the biology and chemistry community. All the best, Jean Denis Pedelacq === Dear Colleagues, The Cambridge Structural Database (CSD), curated by the