Re: [ccp4bb] Measuring angles between domains

Hi Kyle I have used this pymol plugin to measure the angle between domains https://pymolwiki.org/index.php/Angle_between_domains Regards Ishan On Sat, Nov 13, 2021, 12:35 AM Kyle Gregory < 3632e92fcc15-dmarc-requ...@jiscmail.ac.uk> wrote: > Dear CCP4 bulletin board, > > I have two domains

[ccp4bb] Problem with structural alignment

Hi, I am trying to compare multiple homologous structures of a protein, where I am analysing the active site residues and the bound substrate/peptide. I have used multiple methods for alignment in coot and pymol. Every method gives a slightly different orientation in the active site. Based on the