[ccp4bb] New Crystallisation Robot

2020-03-23 Thread Jonathan Davies
? Thanks in advance, Jonathan -- Jonathan Davies, PhD Postdoctoral Researcher, Stenmark Lab Department of Biochemistry and Biophysics Stockholm University Sweden To unsubscribe from the CCP4BB list, click the following

Re: [ccp4bb] Are there any proteins capable of crystallizing at a wide range of pH having the same space group?

2019-09-20 Thread Jonathan Davies
Dear Murphy, See: 1S0F, 1S0E, 1S0D, 1S0C, 1S0B / Jonathan — Jonathan Davies, PhD Postdoctoral Researcher, Stenmark Lab Department of Biochemistry and Biophysics Stockholm University Sweden On 20 Sep 2019, at 01:03, Murpholino Peligro mailto:murpholi...@gmail.com>> wrote: A quick

Re: [ccp4bb] A Max Perutz question

2019-04-10 Thread Jonathan Davies
See below: https://www.nature.com/articles/449144a -- Jonathan Davies, PhD Postdoctoral Researcher, Stenmark Lab Department of Biochemistry and Biophysics Stockholm University Sweden On 10 Apr 2019, at 16:29, Zachary A. Wood mailto:z...@uga.edu>> wrote: Hello Fellow Stru

Re: [ccp4bb] Cys Lys bond?

2018-04-18 Thread Jonathan Davies
Jonathan ____ From: Jonathan Davies Sent: 17 April 2018 18:03 To: CCP4BB@JISCMAIL.AC.UK Subject: Cys Lys bond? Dear CCP4BB, I've recently solved a structure to 1.15 Angstrom which has extremely clear density for what appears to be a lysine covalently bound to a cysteine (S-N). The distance betwe

[ccp4bb] Cys Lys bond?

2018-04-17 Thread Jonathan Davies
Dear CCP4BB, I've recently solved a structure to 1.15 Angstrom which has extremely clear density for what appears to be a lysine covalently bound to a cysteine (S-N). The distance between the cys-S and lys-N is 1.8 A. I thought initially that there may be a methyl group between the two (based

Re: [ccp4bb] Retraction of 2HR0

2016-04-14 Thread Jonathan Davies
Dear all, Below is more of a thought experiment than anything else: Given all the tools that the community has produced for structure validation (WHAT_CHECK, Molprobity etc.) , would it be possible write a script which outputs (with some degree of certainty) whether a structure is fraudulent or

Re: [ccp4bb] Equation Editor woes with Office 2011 for Mac

2015-05-18 Thread Jonathan Davies
Do your collaborators need to edit the equations? If not you can use LaTeXiT (sorry I'm that person!) which allows you to write your equation in LaTeX then export directly into word as a pdf. Link below.. http://www.chachatelier.fr/latexit/ Regards, Jonathan Davies PhD Student Department

Re: [ccp4bb] CCP4 installation problem in Mac OS 10.10

2015-02-09 Thread Jonathan Davies
Hi, See this post which should sort your problem: https://www.jiscmail.ac.uk/cgi-bin/webadmin?A2=ind1410L=ccp4bbP=R1184621=ccp4bb9=AJ=ond=No+Match%3BMatch%3BMatchesz=4 Jonathan Quoting anil kumar anilkumar...@yahoo.co.in: Hello, I recently updated my OS which had a fine running CCP4 package.

Re: [ccp4bb] modeling flexible ends on proteins

2014-10-24 Thread Jonathan Davies
Hi Tommi, Rosetta can do this but it probably isn't as simple as some other solutions already mentioned. https://www.rosettacommons.org/software Cheers, Jonathan On 22/10/14 13:43, Tommi Kajander wrote: Hi All, Would anyone know a software to model (just with some kind of random coil) the