Hello everyone,
I am having a difficult time determining what type of geometry regularization
algorithm is used in Phenix.pdbtools (e.g., least squares, maximum likelihood,
energy minimization, etc.). I would appreciate if anyone can clarify, as well
as point me to the appropriate
I plan to just clean up the data.
for these, or other, programs. We will need to refine
thousands of PDB files so speed is a significant consideration.
Thank you everyone for your input.
Sincerely,
Scott Foy
s...@mail.umkc.edu