> It sounds as though you need the power of the script. You can (from memory)
> run pdbcur to drop the aniso lines and hydrogen atoms, which helps.
Or from command-line:
gemmi convert --anisou=no --remove-h in.pdb out.pdb
> You could probably get it to delete everything except CA's too.
this wo
Dear Jon,
If I understand your question right, I would use Gemmi for this purpose:
https://gemmi.readthedocs.io/en/latest/mol.html
https://gemmi.readthedocs.io/en/latest/analysis.html
It's not in GUI, it involves scripting in Python. It's a very powerful
tool and capable of working with both PD
You could probably get it to delete everything except CA's too.
Best wishes, Jon Cooper. jon.b.coo...@protonmail.com
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Original Message
On 15 May 2024, 13:22, Jon Cooper wrote:
> It sounds as though you need the power of the script. You can (from mem
It sounds as though you need the power of the script. You can (from memory) run
pdbcur to drop the aniso lines and hydrogen atoms, which helps.
Best wishes, Jon Cooper. jon.b.coo...@protonmail.com
Sent from Proton Mail mobile
Original Message
On 15 May 2024, 13:11, Hughes, Jon
hello CCP4 people,
rather off-topic: is there a purpose-written windows editor for PDF files? with
interleaved anisotropy lines, missing column delimiters etc., simply extracting
the B-factors for Ca atoms is hard work using a standard character editor.
would anyone think of working with DNA wit
