Re: [ccp4bb] Check the conformation of one important amino acid

2008-02-19 Thread Li Zhijie
Sorry, I just figured out how to post to the CCP4bb instead of sending a private email. Here are two missed messages that I think should appear on the board: - Original Message - From: "Miles Pufall" <[EMAIL PROTECTED]> To: "Zhijie LI" <[EMAIL PROTECTED]> Sent: Tuesday, February 19, 2

Re: [ccp4bb] Check the conformation of one important amino acid

2008-02-18 Thread Miles Pufall
Or Phenix. Miles On Feb 18, 2008, at 10:28 PM, Juergen Bosch wrote: Chavas Leo wrote: Dear Sun -- I want to check the conformation of one important amino acid in the structure by looking the difference density map. Should I just omit that amino acid in the refinement or should I also omi

Re: [ccp4bb] Check the conformation of one important amino acid

2008-02-18 Thread Juergen Bosch
Chavas Leo wrote: Dear Sun -- I want to check the conformation of one important amino acid in the structure by looking the difference density map. Should I just omit that amino acid in the refinement or should I also omit its flanking amino acids? Which one is better? The real expert will

Re: [ccp4bb] Check the conformation of one important amino acid

2008-02-18 Thread Chavas Leo
Dear Sun -- I want to check the conformation of one important amino acid in the structure by looking the difference density map. Should I just omit that amino acid in the refinement or should I also omit its flanking amino acids? Which one is better? The real expert will talk better than

[ccp4bb] Check the conformation of one important amino acid

2008-02-18 Thread Sun Tang
Dear All experts, I want to check the conformation of one important amino acid in the structure by looking the difference density map. Should I just omit that amino acid in the refinement or should I also omit its flanking amino acids? Which one is better? Thank you very much for you