Re: [ccp4bb] Double covalent ligand

2021-09-16 Thread Rob Nicholls - MRC LMB
Dear Rens, CCP4i2 now contains a CIF dictionary accumulator, which should help with handling such problems (note it's also available as standalone to be used via command line if that's useful). This is used automatically when providing multiple ligand CIF dictionaries to the Refinement

[ccp4bb] Double covalent ligand

2021-09-16 Thread Vries, Rens de
Dear all, I was wondering if there was a good way to generate a restraint file for ligands that are covalently bound to two sites of the same protein. Just to clarify, the ligand can be viewed as a "bridge" between two residues of the same protein monomer. At present, I use JLigand to prepare