Dear all:
I have one subunit PDB of one virus with a NCS record. Which
program should I use to generate a complete virus PDB using the NCS?
Thank you Hong Hsiang
Hi Hong,
you can usually download the 'biological assembly' from the PDBe, be
warned that for viruses this is rather large, cheers, Matt.
On 25/04/2013 08:19, Guan Hong Hsiang wrote:
Dear all:
I have one subunit PDB of one virus with a NCS record. Which
program should I use to
@JISCMAIL.AC.UK] On Behalf Of Guan
Hong Hsiang
Sent: Wednesday, April 24, 2013 11:19 PM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] How to generate a complete viirus PDB
Dear all:
I have one subunit PDB of one virus with a NCS record. Which
program should I use to generate a complete virus PDB
@JISCMAIL.AC.UK
*Subject:* [ccp4bb] How to generate a complete viirus PDB
** **
Dear all:
I have one subunit PDB of one virus with a NCS record. Which
program should I use to generate a complete virus PDB using the NCS?
Thank you
*To:* CCP4BB@JISCMAIL.AC.UK
*Subject:* [ccp4bb] How to generate a complete viirus PDB
** **
Dear all:
I have one subunit PDB of one virus with a NCS record. Which
program should I use to generate a complete virus PDB using the NCS
Jack Johnson Laboratory
From: sujata halder [mailto:halder.suj...@gmail.com]
Sent: Thursday, April 25, 2013 12:32 AM
To: Bradley Kearney
Cc: CCP4BB@jiscmail.ac.uk
Subject: Re: [ccp4bb] How to generate a complete viirus PDB
Hi,
In continuation to the previous suggestion about using
@JISCMAIL.AC.UK] On Behalf Of Guan
Hong Hsiang
Sent: Wednesday, April 24, 2013 11:19 PM
To: CCP4BB@JISCMAIL.AC.UKmailto:CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] How to generate a complete viirus PDB
Dear all:
I have one subunit PDB of one virus with a NCS record. Which program
should I use
Dear Hong,
As Eugene mentioned, you should be able to build the full virus assembly using
PISA.
Another option is to use the multiscale model menu of UCSF Chimera (default
setting is Biological Assembly) to generate the complete virus assembly from
PDB BIOMT records.
If this is a new