[ccp4bb] How to manually dock the rigid molecule into the active site

2011-12-08 Thread Dr. STEPHEN SIN-YIN, CHUI
Dear All, I have a protein crystal co-crystallized with a rigid molecule (solved by small-molecule X-ray method). The color of that crystal is orange (native is colorless) after 2d cocrystallization experiment. Then I collected synchrotron data with a resolution at 1.25 Ang. I can solve it by MR.

Re: [ccp4bb] How to manually dock the rigid molecule into the active site

2011-12-08 Thread Ed Pozharski
On Thu, 2011-12-08 at 17:49 +0800, Dr. STEPHEN SIN-YIN, CHUI wrote: I tried to look at all density regions bit by bit, but the density for the protein atoms always interfere with my vision. Is it possible to mask out the density of protein atoms, Isn't that what difference density map is