Hi every one
I have made a Cif file for the restraints of my ligand with Jligand, which is
attached to my protein via a lysine-aldehyde Schiff base formation.
The problem is that whenever I run the refmac with the Cif file with torsions
and link description, it changes the distance of the
Dear Sam
double bond is only used to find bon lengths and other parameters. Refmac
uses bond length.
As I see you would like to make a link between two residues. There is a
tutorial written by Andrey Lebedev that addresses exactly this type of
problems. Please have a look this site: