Dear Rex,
PDBeMotif is an opensource search tool which works with many motifs as
3D structural as sequence, it can search for ligand environment and
perform 3D search for similar cliffs in proteins.
The tool creates a relational database, it has a data loader and a
search interface.
The
Does anyone know of a program designed to both store information on functional
motifs in proteins, as described in the literature, and to retrieve such motifs
within a given protein sequence?
Rex Palmer
Birkbeck College
