Re: [ccp4bb] Off-topic: protein 2d diagrams

2018-08-04 Thread Gert Vriend
Batch mode generation of residue-based diagrams of proteins Fabien CampagneEmmanuel BettlerGert VriendHarel Weinstein /Bioinformatics/, Volume 19, Issue 14, 22 September 2003, Pages 1854–1855,https://doi.org/10.1093/bioinformatics/btg236 Published: 22 September 2003 On 4-8-2018 10:38, Joana

Re: [ccp4bb] Off-topic: protein 2d diagrams

2018-08-04 Thread Schertler Gebhard (PSI)
Try http://gpcrdb.org/ They have a tool for snake plots of GPCRs Best Gebhard Prof. Gebhard F.X. Schertler Structural Biology ETH Zürich D-BIOL Head of Biology and Chemistry Division Paul Scherrer Institut Laboratory of Biomolecular Research, LBR OFLC 109 CH-5232 Villigen PSI

[ccp4bb] Off-topic: protein 2d diagrams

2018-08-04 Thread Joana Pereira
Dear CCP4 community, I have seen many papers with detailed protein 2d diagrams like this one: However, I can never find a reference for any tool that can compute such diagrams from a 3D structure. Do you know of any? Many thanks and enjoy the warm weather! Joana — Dr. Joana Pereira