[ccp4bb] Rfrees

2010-11-29 Thread Jyotica Batra
Dear All Currently I'm refining my model in refmac5, so is there a way I can switch to phenix.refine by retaining the same R-frees, I have from refmac? Any suggestions at this time would be helpful! Thanks in advance! Thanks! Jyotica

Re: [ccp4bb] Rfrees

2010-11-29 Thread Frederic VELLIEUX
file containing F SIGF FreeRFlag. That's basically it. Fred. Message du 29/11/10 15:31 De : Jyotica Batra A : CCP4BB@JISCMAIL.AC.UK Copie à : Objet : [ccp4bb] Rfrees Dear All Currently I'm refining my model in refmac5, so is there a way I can switch to phenix.refine by retaining

Re: [ccp4bb] Rfrees

2010-11-29 Thread Tim Gruene
is 0 or 1 (out of usually 0-19 for 5% of flagged relfections), but I guess, phenix uses the same in order not to make the transition too difficult... Tim Fred. Message du 29/11/10 15:31 De : Jyotica Batra A : CCP4BB@JISCMAIL.AC.UK Copie à : Objet : [ccp4bb] Rfrees Dear All

Re: [ccp4bb] Rfrees

2010-11-29 Thread Nat Echols
On Mon, Nov 29, 2010 at 6:50 AM, Tim Gruene t...@shelx.uni-ac.gwdg.de wrote: But you have to make sure that refmac5 uses the same integer for flagged reflections as refmac does. If I remember correctly, the default in the ccp4i gui for refmac is 0 or 1 (out of usually 0-19 for 5% of flagged

Re: [ccp4bb] Rfrees

2010-11-29 Thread Edwin Pozharski
On Mon, 2010-11-29 at 14:30 +, Jyotica Batra wrote: is there a way I can switch to phenix.refine by retaining the same R-frees, I have from refmac If you actually mean the test set, then you don't need to do anything other than use the same mtz-file.  Keep in mind though that in phenix by