Re: [ccp4bb] Visualize symmetry operations

2017-01-04 Thread Robert Campbell
Hi Aaron, I have a PyMOL plugin based on cctbx (i.e. it requires the installation of cctbx) that will do this. This allows one to make images like this: http://pldserver1.biochem.queensu.ca/~rlc/work/pymol/pymol_symmetry.png The script is called draw_symops_cctbx.py and is available here:

Re: [ccp4bb] Visualize symmetry operations

2017-01-04 Thread Pavel Afonine
Explore this: http://cci.lbl.gov/cctbx/ Pavel On Wed, Jan 4, 2017 at 8:20 AM, Aaron Finke wrote: > Dear CCP4-keteers, > > Is there a program that can visualize symmetry operation positions (e.g. > twofold screws, fourfolds) in protein structures, like CCDC Mercury does >

Re: [ccp4bb] Visualize symmetry operations

2017-01-04 Thread chemocev marker
Hi Aaron may be this tool can be helpful https://symd.nci.nih.gov/ or in the pymol there is script https://pymolwiki.org/index.php/Symmetry_Axis Visualizing the transformation between two selections/objects https://pymolwiki.org/index.php/RotationAxis PDB has a symmetry browser

[ccp4bb] Visualize symmetry operations

2017-01-04 Thread Aaron Finke
Dear CCP4-keteers, Is there a program that can visualize symmetry operation positions (e.g. twofold screws, fourfolds) in protein structures, like CCDC Mercury does for small molecules? Thanks in advance, Aaron -- Aaron Finke Staff Scientist, MacCHESS