Re: [ccp4bb] displaying residues (as a surface perhaps) for one component of a p-p-i

2022-05-31 Thread Oganesyan, Vaheh
So does PISA with great detailed info on interface residues available. VO From: CCP4 bulletin board On Behalf Of Jan Dohnalek Sent: Tuesday, May 31, 2022 2:48 AM To: CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] displaying residues (as a surface perhaps) for one component of a p-p-i Dear Fred

Re: [ccp4bb] displaying residues (as a surface perhaps) for one component of a p-p-i

2022-05-30 Thread Jan Dohnalek
Dear Fred, CCP4MG has this capability of automated interface display. When opening a structure you can select from many predefined styles of display. My favourite is Interfaces, then "residues", the surface can be displayed when you ask for PISA analysis within CCP4MG and then select a particular i

[ccp4bb] displaying residues (as a surface perhaps) for one component of a p-p-i

2022-05-30 Thread Fred Vellieux
Dear bb members, I am quite certain that someone must have needed to do this already. I looked at publications but no details were given concerning how figures were prepared. So here is the problem: Given a protein protein interface (with the 3D structure of the complex available) I am look