[ccp4bb] loading maps in coot using EDS

2012-08-08 Thread Shya Biswas
Hi all, I was trying to get maps using the *fetch PDB and Map using EDS option* in coot, however the map would not open I am using coot version 0.6.2 was wondering if anybody else had similar problems and how to fix this, the following is the error message I get. It used to work fine with a

Re: [ccp4bb] loading maps in coot using EDS

2012-08-08 Thread Dale Tronrud
It appears that the Electron Density Server could not calculate a map for 3TVN. These cryptic messages are what you get from Coot when there is no map on the server. I can see from the RCSB web page that there is no EDS link in the Experimental Details section, which also happens when the EDS

Re: [ccp4bb] loading maps in coot using EDS

2012-08-08 Thread Katherine Sippel
The 3tvn coordinates/SF were released today. I'm not sure what the lag time is between the PDB and EDS but you'd probably need to download the structure factors and generate the map yourself. If you're not in a super rush I know the person who refined that specific PDB and I may be able to get

Re: [ccp4bb] loading maps in coot using EDS

2012-08-08 Thread Dale Tronrud
On 08/08/12 14:31, Katherine Sippel wrote: The 3tvn coordinates/SF were released today. I'm not sure what the lag time is between the PDB and EDS but you'd probably need to download the structure factors and generate the map yourself. A very good point. I saw the deposition date of 2011

Re: [ccp4bb] loading maps in coot using EDS

2012-08-08 Thread Paul Emsley
On 08/08/12 21:39, Shya Biswas wrote: Hi all, I was trying to get maps using the *fetch PDB and Map using EDS option* in coot, however the map would not open I am using coot version 0.6.2 was wondering if anybody else had similar problems and how to fix this, the following is the error

Re: [ccp4bb] loading maps in coot using EDS

2012-08-08 Thread Shya Biswas
Hi, Thanks, I think the problem is with the EDS server as I tried numerous pdb files (not just the 3TVN) and none of them worked so far. Shya On Wed, Aug 8, 2012 at 5:47 PM, Paul Emsley paul.ems...@bioch.ox.ac.ukwrote: On 08/08/12 21:39, Shya Biswas wrote: Hi all, I was trying to get maps

Re: [ccp4bb] loading maps in coot using EDS

2012-08-08 Thread Edward A. Berry
Shya Biswas wrote: Hi, Thanks, I think the problem is with the EDS server as I tried numerous pdb files (not just the 3TVN) and none of them worked so far. Shya I suppose that when the first message in this thread came out yesterday morning, it was a signal for hundreds of thousands of WW