Re: [ccp4bb] refmac problem with anisotropic Us

2011-06-14 Thread Matthew Franklin
On 6/10/11 6:10 PM, Ed Pozharski wrote: On Fri, 2011-06-10 at 12:48 -0700, Ethan Merritt wrote: I don't think that combination makes any sense. Whatever anisotropic is being described by the TLS parameters can also be fully described by the individual anisotropic U^ij terms. So the TLS

[ccp4bb] refmac problem with anisotropic Us

2011-06-10 Thread Matthew Franklin
Hi all - I seem to be encountering a problem with Refmac refinement of a structure containing anisotropic B factors. I have been using TLS refinement and individual anisotropic B refinement, which may not be correct technique, but it does lower my R and Rfree versus aniso B refinement alone

Re: [ccp4bb] refmac problem with anisotropic Us

2011-06-10 Thread Ethan Merritt
On Friday, June 10, 2011 12:33:10 pm Matthew Franklin wrote: Hi all - I seem to be encountering a problem with Refmac refinement of a structure containing anisotropic B factors. I have been using TLS refinement and individual anisotropic B refinement, which may not be correct technique,

Re: [ccp4bb] refmac problem with anisotropic Us

2011-06-10 Thread Pavel Afonine
Hi, I seem to be encountering a problem with Refmac refinement of a structure containing anisotropic B factors. I have been using TLS refinement and individual anisotropic B refinement, which may not be correct technique, but it does lower my R and Rfree versus aniso B refinement alone

Re: [ccp4bb] refmac problem with anisotropic Us

2011-06-10 Thread Ed Pozharski
On Fri, 2011-06-10 at 12:48 -0700, Ethan Merritt wrote: I don't think that combination makes any sense. Whatever anisotropic is being described by the TLS parameters can also be fully described by the individual anisotropic U^ij terms. So the TLS parameters are entirely redundant, leading

Re: [ccp4bb] refmac problem with anisotropic Us

2011-06-10 Thread Robbie Joosten
Hi Ethan, I also reset the temperature factors to 20 at the beginning of each refinement round. The refinement resolution is 75 to 1.8 A, and the space group is C2, if it matters. I am virtually certain that refinement of individual anisotropic U^ij terms cannot be justified at 1.8A.