Re: [ccp4bb] shelx anamalous data

2013-11-17 Thread Tim Gruene
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Dear Yarrow, the data in the phs-file are not the original data, they are density modified, which includes the amplitudes. If you convert them to mtz, you should really know what you are doing - you might end up depositing a PDB file refined against

Re: [ccp4bb] shelx anamalous data

2013-11-16 Thread Eleanor Dodson
It is easy enough if you still ant to do it. I would feed both into f2mtz separately to make a mysadIplus.mtz and a mysadImin.mtz then use CAD to combine and change the default labels to something like I(+) SIGI(+) and I(-) SIGI(-) But as George says Why do you want it? That will change the

[ccp4bb] Fwd: Re: [ccp4bb] shelx anamalous data

2013-11-16 Thread George Sheldrick
*Dear Eleanor, There is a reason why I do not provide a routine to go from the .phs from shelxe to .mtz. If he uses the 'free lunch' option in shelxe he may finish up refining against the free lunch structure factors. According to one user who managed to do this by accident, this gives

[ccp4bb] shelx anamalous data

2013-11-14 Thread Yarrow Madrona
I'm sorry, I have not used shelx before and didn't realize in my last post that the anamolous data is kept separate. I am planning on converting both the mysad.phs and mysad.pha to mtz files and then merge them. However, I am not sure of the column lables in mysad.pha. Does anyone know how to get

Re: [ccp4bb] shelx anamalous data

2013-11-14 Thread George Sheldrick
I'm not sure why you want to do that. If you wish to look at a map or poly-Ala trace from SHELXE, just read the .pdb and then .phs files into Coot directly. If you want to use them to make pictures with PYMOL, use Tim Gruene's SHELX2map. For further information please go to the SHELX homepage