Re: [ccp4bb] PEG molecule crossing a two-fold crystallographic symmetry axis

2009-04-29 Thread Tim Gruene
Hello Chandrika, you can either set the occupancy of the molecule to 0.5 and refine it as a whole molecule or leave the occupancy at 1, refine only one half of the molecule and let the symmetry operator do the rest. Chemically the first way makes more sense to me: even though the PEG

Re: [ccp4bb] PEG molecule crossing a two-fold crystallographic symmetry axis

2009-04-29 Thread lidefeng
Hi everyone, Following Chandrika's question, what should I do if one peptide chain crosses a two-fold crystallographic symmetry axis? The peptide is not symmetric and the sidechain of one Se-Met (two after CS operation) is determined and conformed by MAD. Your sincerely