Re: [ccp4bb] help with Buccaneer

2017-01-23 Thread Christian Roth
Depending on the actual thing you want to do. The options vary a lot. If you have a MR model I strongly recommend gui2 and the MR mode. In that case you supply the model and Buccaneer runs Refmac in advance to generate the necessary phase information it needs. If you have run CRANK2 in gui2 use

Re: [ccp4bb] help with Buccaneer

2017-01-22 Thread Vikram Dalal
Thanks to all for suggestions.

Re: [ccp4bb] help with Buccaneer

2017-01-20 Thread Bellini, Dom
. D From: CCP4 bulletin board <CCP4BB@jiscmail.ac.uk> on behalf of Carlos CONTRERAS-MARTEL <carlos.contreras-mar...@ibs.fr> Sent: 20 January 2017 07:33:28 To: CCP4BB@jiscmail.ac.uk Subject: Re: [ccp4bb] help with Buccaneer You need go first for

Re: [ccp4bb] help with Buccaneer

2017-01-19 Thread Carlos CONTRERAS-MARTEL
You need go first for some density improvement, see http://ccp4wiki.org/~ccp4wiki/wiki/index.php?title=Automated_phase_improvement_with_Parrot All the best Carlos On 01/20/17 05:10, Vikram Dalal wrote: Hi Everyone, I want to run the Buccaneer. I need Hendrickson-Lattman coefficients for

Re: [ccp4bb] help with Buccaneer

2017-01-19 Thread Edward A. Berry
When faced with a program requiring HL coefficients, and having phases from a (partial) model, I used to run a ccp4 program called sigmaa to generate the HL coefficients. I'm not sure if this is theoretically a good idea, but at least it allows the program to run. On 01/19/2017 11:10 PM, Vikram