[ccp4bb] Coming July 29: Improved Carbohydrate Data at the PDB

2020-07-09 Thread John Berrisford
Dear CCP4BB PDB data will shortly incorporate a new data representation for carbohydrates in PDB entries and reference data that improves the Findability and Interoperability of these molecules in macromolecular structures. In order to remediate and improve the representation of carbohydrates

[ccp4bb] Two postdoc positions available at OSU

2020-07-09 Thread Tianmin Fu
Hi there, *Two postdoctoral fellow* positions are immediately available in Tianmin Fu’s laboratory in the Department of Biological Chemistry and Pharmacology at the Ohio State University. The positions are supported by NIH and departmental funding to study molecular mechanism of signaling protein

Re: [ccp4bb] Domain Motion Analysis

2020-07-09 Thread Guenter Fritz
Dear Antony, similar to the approach Eleanor has described, lsqman will give you rotational matrix and translation vector. http://xray.bmc.uu.se/usf/lsqman_man.html Best regards, Guenter Hi, You can try elNemo server. Regards, Nasrin PhD scholar On Wed, Jul 8, 2020, 10:16 PM Antony

[ccp4bb] [OFF TOPIC] Cell biology bb

2020-07-09 Thread Rafael Marques
Hi Folks, how are you doing? Hope everyone is safe! I was wondering if there is a bulletin board email group like this one concerning Cell Biology, where we could find not only discussions about related topics but also post-doc opportunities. I would be very glad if you guys know any and could

[ccp4bb] RES: [ccp4bb] Looking for suggestions with protein expression

2020-07-09 Thread Rafael Marques
Hi Umar, I must say that it would be better use as an expression system Rosetta DE3 or Rosetta-gami instead of BL21. In our lab we generally use BL21 for plasmid replication. Also, there are a few things that you could try before trying another construction. 1. Lower the temperature

Re: [ccp4bb] RES: [ccp4bb] Looking for suggestions with protein expression

2020-07-09 Thread Jon Cooper
Re:  "In our lab we generally use BL21 for plasmid replication."I am interested because on the occasions that I prepared plasmids in BL21 (usually by mistake), they were never any good for cloning or sequencing. I always had to transform them back into a cloning strain and do another plasmid prep!