On Mar 2, 2011, at 11:13 PM, Ting-Wei Jiang wrote:
> I'm trying to calculate R-value (and free R) specifically which is between
> data and the modified structure(refined by myself without help from any
> program)
You probably mean "without help from any refinement program."
Why not fix all at
Dear TingWei,
Can you provide more details of what you are trying to do and why, and how you
manipulated the model for which you want to determine the R-values? Is it data you
collected and a model that you have been working on or is it a structure and its data
from the PDB that you are worki
Dear all experts,
I'm trying to calculate R-value (and free R) specifically which is between
data and the modified structure(refined by myself without help from any
program).I've looked the program for calculating a long while.Actually,I
found one named Rsearch (CCP4 supported).Nevertheless,I can
Thanks for the comments, I do appreciate them. I guess we went off in a
direction I wasn't thinking of - related to your personal like or
dislike of stereo. What I am really looking for is an answer to a
simple question in that is stereo a nice thing from a pedagogy
standpoint for showing stu
Hi all,
As you may recall, the Protein Data Bank in Europe (PDBe; http://pdbe.org)
announced a substantial make-over of its website last summer, including the
release of a number of new features (such as PDBprints -
http://pdbe.org/pdbprints - and a biologist-friendly structure browser -
http
Dear all,
suggestion how to run autoxds on MAC OSX?
I downloaded a script without success...do you know if are there others?
Thanks,
Marco
Dear all
The registration website is now live - see
http://www.iucr.org/resources/commissions/crystallographic-computing/
schools/mieres2011
We had to change venue at a late stage, so although we are still
calling it the "Mieres" School, it is now going to take place in
Oviedo, about 20k
This does not work if you link version A against version B as suggested by Paul
in the libldap case (but that may have been on coot list, I am not sure).
The coot setup script does set LD_LIBRARY_PATH.
Tim
On Wed, Mar 02, 2011 at 11:47:57AM -0500, David Schuller wrote:
> An alternative to puttin
Hi there
Sort of off topic...
Does anyone know of a good resource/literature which demonstrates the
pKa and other physical chemistry of Myristate and other fatty acids?
Thanks for any info in advance
Gina
Notice: This e-mail message, together with any attachments, contains
information of
My take on things is that the helpfulness of stereo depends inversely on
the resolution (and/or quality) of the data. If I'm dealing with a 4-5
Angstrom map, stereo is more or less required. For high quality 2-3
Angstrom data, not so much.
For teaching purposes, it's probably a good idea to
An alternative to putting links in a directory would be defining an
environmental variable giving applications a search list of directories
to check. You could give it a catchy name like LD_LIBRARY_PATH or some such.
--
===
All
Course Announcement - LAST REMINDER
Second Course on Neutron Scattering Applications in Structural Biology
Oak Ridge, TN. May 23 - May 27, 2011
Application deadline: March 11, 2011
No registration fee. Travel and accommodation grant available.
Detailed information available on the course web page:
The Wellcome Trust/Cancer Research UK Gurdon Institute and Department of
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Salary: £27,428 to £35,788
Limit of Tenure applies*
The Wellcome Trust/Cancer Research UK Gurdon Institute is a leading cancer and
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Dear Marius,
To these two centres to which you refer we can add:-
Diamond Light Source; contact person Prof David Allan (small molecule
Laue X-ray crystallography);
Institut Laue Langevin ; contact person Dr Matthew Blakeley (neutron
Laue protein crystallography);
Los Alamos Neutron Source; contact
Hi,
A Laue diffraction pattern is a diffraction pattern recorded using
polychromatic ("white") radiation. Hence the beam line optics is for
focusing the radiation onto the sample (the crystal) but not to select a
single wavelength (a monochromator). Just to make it simple to understand.
Cont
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