Dear Frank,
I would only add to Randy's excellent suggestions a commendation of Max
Perutz's book
Is Science necessary
http://www.amazon.com/Is-Science-Necessary-Essays-Scientists/dp/0192861182
It includes global longevity and food production issues and improvements. Of
course these are wider
Dear BB,
We are still a bit confused about compatibility of graphics cards with 3D
Coot/PyMol in Linux:
(a) In previous CCP4bb discussions, it was stated that only Quadro cards are
compatible with Linux setups. But could someone tell me what the minimum
standard really is: is it Quadro FX380,
(a) In previous CCP4bb discussions, it was stated that only Quadro cards
are compatible with Linux setups. But could someone tell me what the
minimum standard really is: is it Quadro FX380, 2000, 3800 or something
else ? The nVidia site lists Quadro 3700 and 3800 as the two lowest
(cheapest)
Sorry to contradict,
But the mmCIF data model certainly does not seem to require hkl unique
within the reflection data.
Like CIF the mmCIF formalism has been developed to allow a complete
description of a diffraction experiment and the data arising from it.
There is a full description at
Hi Emmanuel
Here we have tried the nvidia Quadro 2000 with two different monitors
(both with the built-in IR emitter, thus with synching through DVI):
ASUS VG278HR and BenQ XL2420TX. The setup works perfectly well in Linux,
both pymol and coot work without issues. Unfortunately we have no
Hi Martyn,
I too was puzzled by the statement that unmerged data
cannot be handled properly as part of a PDB deposition.
We have deposited the unmerged original index intensities
for the refinement wavelength (and for additional wavelengths
used for phasing in the case of MAD) since 2005.
Hi all,
Sorry for contributing to the noise as well as the signal in the discussion.
To clarify:
It is not an issue of not having a place to put the data as we certainly have
definitions for this and for intermediate phasing data sets. You cannot simply
put the data into the current REFLN
Dear all,
At Global Phasing, we have seen that there are still issues with the way
that different applications deal with mmCIF-format data, and this continues
to cause problems for users. I believe that part of the reason for this is
that the underlying syntax (the STAR format) is not
Postdoctoral Fellow Position in Biochemistry/Structural Biology
The research group of Demet Arac-Ozkan, Ph.D. at the University of Chicago is
seeking a postdoctoral fellow with expertise in protein biochemistry. The
laboratory is housed in the Department of Biochemistry and Molecular Biology.
Thanks to all who engaged with my little puzzle. The weekend is over
and I'm not exactly closer to fitting the right pieces into the density.
Benzamidine was a good suggestion for the first bit of density.
However, I didn't use that inhibitor during purification. The second
set of blobs
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