From:

http://www.ccp4.ac.uk/ccp4bb.php

“CCP4bb is an electronic mailing list intended to host discussions about topics 
of general interest to macromolecular crystallographers. Any 
crystallographic-related item is acceptable, and doesn't have to be directly 
related to CCP4. The bulletin board is routinely used to request information, 
and to inform people about job vacancies, new services and the availability of 
new or updated software.”

“Some specific rules:


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I for one do not feel that the message below meets these guidelines as it would 
appear to me to be a personal matter between yourself and your supervisor. I 
suspect others share my opinion.

Regards Graeme

From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of Smith Lee
Sent: 20 October 2015 09:41
To: ccp4bb
Subject: [ccp4bb] a question related to structurebiology publication

Dear All,

At a specific time I joined a lab working on protein complex. Before I joined 
the lab they collaborate with the other crystallography lab and get the 
diffraction data of several crystals (including the initial models, which were 
without any refinements, including the registration errors, the poor 
Ramachandran outliers, the poor rotamer outliers, the loop missing, etc). 
Clearly my host lab did not have the ability to do the refine, and they also 
did not hope their previous collaborator to work on the refine.

I joined the lab at this critical point, and complete all the refinements. In 
addition, during the refinement process I have some significant discoveries on 
the biology sides by solving the refinement process (for example, without my 
establishing the missing loops, the 3-D structural cannot explain any biology 
function at all, which was recognized by the lab).

Besides, in this lab I also worked on several structures based on cryo-EM map. 
The map data was not collected and processed by me, but the model was built by 
me, and the refinement was done by me. During the refinement process, all (or 
most or some) the biological functions have been explained by me based on the 
structure.

I did not take part in the biochemistry part research, but all the mutations 
(the only biochemistry .research related done in the lab) were designed base on 
the 3-D structure I refined (for crystallography structure) or I modelled and 
refined (for the cryo-em structure).

Now the lab started to write the publications. At this moment the boss have not 
informed me to join the several-group for the writing.

Most importantly the boss has requested me several times to tell exactly how to 
solve the structure I solved to my fellows (who were in writing the publication 
now), which I have not disclosed.

Further, if I told them, it seems they would repeat the process, and even they 
repeat exactly my way, the final results can be a little different, for example 
the Ramachandran favoured can be 93.25 for one run to 93.10 for the repeat run 
, in this way they would claim the structure solving was done by themself.

Another situation was that, the ones starting writing the manuscripts could not 
solved the 3-D structures at all, but the boss has phone to somebody else that 
the 3-D structure was solved by that guy. And the guy even claimed he built the 
cryo-em model in the large scale group meeting in the situation both the 
building and refine were completed by myself.

The other trend was that, the other lab members especially lacked structure 
biology knowledge. When I made a PPT on my structure biology research, after 
several days they would say my figures were not nicely prepared (but my PPT is 
for the purpose at the moment of preparation), and they tod me they will 
prepare much better one (in this way they can modify mine), in this way it 
seems they would regarded I have not taking part in the publications if they 
publish (the boss claim if he did not adopt any of my research for the 
publication, what should I do).

When I negotiated with my boss to join his group, I have told him the reason I 
joined his group is that I intended to have more papers.

Considering the situation, will you please advise how can I protect my right as 
the co-author and even my right as the major co-author?


Best regards.


Smith



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