Hi Ethan,
You need to put the files of PDB format in your own database or library.
The error message in get_structure*log shows that BALBES encountered
problems when it started to read your files to prepare the template models.
Thanks,
Fei
On Wed, 22 Jun 2011 10:26:26 -0700, Ethan Merritt
Sorry Ed,
We will add that function to the server in a few days.
Fei
On Wed, 27 Apr 2011 13:49:17 -0400, Ed Pozharski epozh...@umaryland.edu
wrote:
Is there any way to download all of the files produced by a BALBES run
on YSBL server at once (as opposed to going through every item
Dear Victor,
Thank you very much for telling us that. Although it is a little
strange to me because the same set of the fortran programs and python
scripts are used in both the webserver version and standalone version
of BALBES (except one fortran program I will mention later), we try to
find
Dear BALBES users,
Since Garib announced new release of BALBES on June 25, many of you
have submitted the jobs to run BALBES via the YSBL web server. Our
computer cluster, which supports web server, has soon reached the
limit and been running with full loading since early June 26. Many of
your
Dear BALBES users,
Our web servers had a problem yesterday and now is working properly.
But our cluster machine reaches its limit now. There are 23 users
currently running BALBES jobs on the server and some of them submitted
jobs twice using multiple space group candidate option, which means
one
Dear Victor and Ronan,
BALBES has a new version (1.0.0), with substantial changes in
organization and functionality, implemented on the YORK web server
very recently, you will expect to hear the announcement for that from
Garib very soon. In the new version, the module 'subprocess' or
'popen2'
a solution when using just the known structure of
Protein 2 as a model. Is there a way to accomplish this?
Sincerely,
Jesse
On Wed, Jan 28, 2009 at 1:25 PM, Dr. F Long f...@ysbl.york.ac.uk wrote:
Dear Jesse,
In both cases, there are some log files under, e,g.
Test/process_details
年1月5日，周一, Dr. F Long f...@ysbl.york.ac.uk 写道：
发件人: Dr. F Long f...@ysbl.york.ac.uk
主题: Re: [ccp4bb] problem about BALBES
收件人: CCP4BB@JISCMAIL.AC.UK
日期: 2009,15,周一,3:09上午
Dear Xiang Liu,
From the log file, it looks you use a version of Python that comes
with CCP4 and the lib file
