Re: [ccp4bb] Has anyone successfully used RoseTTAFold or AF2 to guide crystallization?

2022-04-04 Thread John R. Walker
It may also be useful to look at homologues of the protein of interest, as sometimes Alphafold shows very different domain arrangements despite close sequence similarity. John On Mon, Apr 4, 2022 at 3:17 PM Andrew Lovering wrote: > Hi Scott > We have obtained a structure of a flexible

Re: [ccp4bb] AW: [ccp4bb] A "funny" thing related to AlphaFold2 ....

2021-08-27 Thread John R. Walker
I just change MODEL 0 to MODEL 1 then it works fine. John On Fri, Aug 27, 2021 at 11:03 AM Schreuder, Herman /DE < herman.schreu...@sanofi.com> wrote: > Dear Nick, > > > > I had just looked at a pdb downloaded from the alphafold server without > problems. However, then I realized that I had

[ccp4bb] Cryotools

2011-06-15 Thread John R. Walker
-- John R. Walker, Ph.D. Structural Genomics Consortium University of Toronto Toronto, Ontario Canada