[ccp4bb] Refmac library

[brian walker]

Is there a 3 letter code for D-methionine in refmac library. It is not
listed in library, while all the others are?

[ccp4bb] binding surface

[brian walker]

I am looking for a program that will map out the binding surface of a dimer
interface.  For example if you have a PDB can you draw a colored surface
for the contact sites.
Specifically what I want to do is look at the interface for multiple dimer
parteners and show how they overlap.

Is that a program that will do this easily?

[ccp4bb] LCP lipids

[brian walker]

If you were going to start with 4 different LCP lipids what would they be?
9:9, 9:7 etc? why- channel size, temp range?

Re: [ccp4bb] H -3

[brian walker]

Thanks for the advice.  What ultimately worked was going back to CCP4
6.1.3.  I was able to use the Scalepack to MTZ in that version and it
handled the R -3 (SG 148) just fine. I was able to use the MTZ from
6.1.3  in the current release 6.3 and phaser and refmac ran fine. So
the issue was in the way the new scalepack to MTZ handles SG 148.

Thanks
Brian



On 3/1/13, Roger Rowlett rrowl...@colgate.edu wrote:
 I have found that rumning sort/index and reassigning the space group as h3
 sorts this issue.

  On Mar 1, 2013 8:15 PM, brian walker brianwalkerwash...@gmail.com
 wrote:

 I am trying to use H -3 in CCP4i.  Scalepack seems to finsh and
 recognize space group 148.  Phaser crashes with input error -1 is not
 zero or positive.
 Refmac crashes with child killed: segment violation.  Interestingly
 this is not the first H3 bar space group I have had and when I use a
 MTZ made with an older version of CCP4i it works.  Have the sym
 libraries changed or anything in new newer versions? I suspect a
 scalepacktoMTZ issue but I am not sure?

[ccp4bb] Monitor

[brian walker]

I am looking for a good CRT monitor for crystallography that supports stereo
well.
CRT monitors particularly large 20 inch viewable are harder to find these
days.
Any suggestions on the best monitor?

Are any large LCDs capable of stereo support?

Brian

[ccp4bb] Monitor

[brian walker]

I am looking for a good CRT monitor for crystallography that supports stereo
well.
CRT monitors particularly large 20 inch viewable are harder to find these
days.
Any suggestions on the best monitor?

Are any large LCDs capable of stereo support?

Brian