Re: [ccp4bb] [EXTERNAL] Re: [ccp4bb] ILLUSTRATE in PYMOL
Hi Faisal, You can make similar striking images with the illustrative1 and 2 options in Qutemol https://sourceforge.net/projects/qutemol/. Qutemol ran on Windows10 for me this morning. It does not run on the newer macOS operating systems. Only the binaries are available. It has not been updated since 2007. Best regards, Blaine Blaine Mooers, Ph.D. Associate Professor Department of Biochemistry and Molecular Biology, College of Medicine Director of the Laboratory of Biomolecular Structure and Function Academic Director, Biomolecular Structure Core, COBRE in Structural Biology Full Member, Cancer Biology Program, Stephenson Cancer Center University of Oklahoma Health Sciences Center Mailing Address: 975 NE 10th Street, BRC 466 Oklahoma City, OK 73104-5419 Office: 405-271-8300 Lab: 405-271-8312 Websites: Faculty page: https://basicsciences.ouhsc.edu/bmb/Faculty/bio_details/mooers-blaine-hm-phd BSC-OKC (LBSF): https://research.ouhsc.edu/Core-Facilities/Laboratory-of-Biomolecular-Structure-and-Function COBRE in Structural Biology: https://www.ou.edu/structuralbiology From: CCP4 bulletin board on behalf of khaja faisal tarique Sent: Wednesday, August 16, 2023 6:46 AM To: CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] [EXTERNAL] Re: [ccp4bb] ILLUSTRATE in PYMOL Thanks all. I am almost there making similar figs as in ILLUSTRATE. It is amazing. Just wondering if we can make similar stuffs in ChimeraX ?. Faisal On Tue, 15 Aug 2023, 23:22 Jared Sampson, mailto:jared.samp...@columbia.edu>> wrote: Hi Faisal - In addition to the `specular`, `ray_trace_mode`, and `ray_trace_gain` settings Blaine pointed out, you can also adjust the `direct` and `ambient` lighting settings, as well as `light_count` (which I believe only affects direct and specular lighting, not ambient). For example, these worked pretty well for me: ``` set ray_trace_mode, 3 set ray_trace_gain, 0 set specular, 0 set direct, 0 set ambient, 0.9 ``` Note that you'll have to ray trace (`ray`) to see the outlines. Also it looks like the tRNA image on the CCSB Illustrate site uses slightly different colors for different parts of the molecule (phosphate, sugar, base), which is a nice effect. Hope that helps. Cheers, Jared On Tue, Aug 15, 2023 at 10:40 PM Mooers, Blaine H.M. (HSC) mailto:blaine-moo...@ouhsc.edu>> wrote: Hi Faisal, I made a number of such figures several years ago. I finally found the code. Load the molecule of interest into PyMOL and paste the following code onto the command line just below the command history window. I was using our school colors: crimson and cream. Ligands are colored crimson. Change to suit your needs. as surface set_color crimsom, [165,42,42]; set_color cream, [221,203,164]; color crimsom, org; color cream, not org; remove solvent set_color bground, [252,250,249]; bg_color bground; # set the view # orient all within 8 of org # set the lights, ray tracing setttings # to get the Goodsell-like rendering unset specular set ray_trace_gain, 0 set ray_trace_mode, 3 bg_color white set ray_trace_color, black set depth_cue, 0 #ray png Goodsell1test.png, 1200,1200,600,1 Best regards, Blaine Blaine Mooers, Ph.D. Associate Professor Department of Biochemistry and Molecular Biology, College of Medicine Director of the Laboratory of Biomolecular Structure and Function Academic Director, Biomolecular Structure Core, COBRE in Structural Biology Full Member, Cancer Biology Program, Stephenson Cancer Center University of Oklahoma Health Sciences Center Mailing Address: 975 NE 10th Street, BRC 466 Oklahoma City, OK 73104-5419 Office: 405-271-8300 Lab: 405-271-8312 Websites: Faculty page: https://basicsciences.ouhsc.edu/bmb/Faculty/bio_details/mooers-blaine-hm-phd BSC-OKC (LBSF): https://research.ouhsc.edu/Core-Facilities/Laboratory-of-Biomolecular-Structure-and-Function COBRE in Structural Biology: https://www.ou.edu/structuralbiology From: CCP4 bulletin board mailto:CCP4BB@JISCMAIL.AC.UK>> on behalf of Pius Padayatti mailto:ppadaya...@gmail.com>> Sent: Tuesday, August 15, 2023 8:24 PM To: CCP4BB@JISCMAIL.AC.UK<mailto:CCP4BB@JISCMAIL.AC.UK> mailto:CCP4BB@JISCMAIL.AC.UK>> Subject: [EXTERNAL] Re: [ccp4bb] ILLUSTRATE in PYMOL https://pymolwiki.org/index.php/APBS<https://urldefense.com/v3/__https://pymolwiki.org/index.php/APBS__;!!GNU8KkXDZlD12Q!9eD_ProG0wUZ-JErjGALFQIrpgJlQO_bYGkQ0_iklgY0qfFv6IblDBIQ_JwWVq4rFViNFwN_v8t_mnr6vVLzKnD4$> Pius Padayatti On Tue, Aug 15, 2023 at 5:20 PM khaja faisal tarique mailto:khajafaisaltari...@gmail.com>> wrote: Hi everyone Is there any way to make surface representation of a protein structure similar to the 'Illustrate: Non-photorealistic Biomolecular Illustration' (https://ccsb.scripps.edu/illustrate/<https://urldefense.com/v3/__https://ccsb.scripps.edu/illustrate/__;!!GNU8KkXDZlD12Q!9eD_ProG0wUZ-JErjGALFQIrpgJlQO_bYGkQ0_iklgY0qfFv6IblDBI
Re: [ccp4bb] [EXTERNAL] Re: [ccp4bb] ILLUSTRATE in PYMOL
Hi Faisal, Not sure about ChimeraX, but you can do quite amazing things with coot as Lucrezia Catapano has shown to us. Tutorial: https://www.youtube.com/watch?v=tCpCmBTgt6s Cheers, Helena -- Helena Taberman Beamline Scientist, PhD Beamline P11 (PETRA III) Deutsches Elektronen-Synchrotron DESY Notkestrasse 85 22607 Hamburg Germany Phone: +49 40 8998 5546 Email: helena.taber...@desy.de > On 16. Aug 2023, at 13:46, khaja faisal tarique > wrote: > > Thanks all. I am almost there making similar figs as in ILLUSTRATE. It is > amazing. Just wondering if we can make similar stuffs in ChimeraX ?. > > Faisal > > On Tue, 15 Aug 2023, 23:22 Jared Sampson, <mailto:jared.samp...@columbia.edu>> wrote: > Hi Faisal - > > In addition to the `specular`, `ray_trace_mode`, and `ray_trace_gain` > settings Blaine pointed out, you can also adjust the `direct` and `ambient` > lighting settings, as well as `light_count` (which I believe only affects > direct and specular lighting, not ambient). For example, these worked pretty > well for me: > > ``` > set ray_trace_mode, 3 > set ray_trace_gain, 0 > set specular, 0 > set direct, 0 > set ambient, 0.9 > ``` > > Note that you'll have to ray trace (`ray`) to see the outlines. Also it > looks like the tRNA image on the CCSB Illustrate site uses slightly different > colors for different parts of the molecule (phosphate, sugar, base), which is > a nice effect. > > Hope that helps. > > Cheers, > Jared > > > On Tue, Aug 15, 2023 at 10:40 PM Mooers, Blaine H.M. (HSC) > mailto:blaine-moo...@ouhsc.edu>> wrote: > Hi Faisal, > > I made a number of such figures several years ago. > I finally found the code. > > Load the molecule of interest into PyMOL > and paste the following code onto the command line > just below the command history window. > I was using our school colors: crimson and cream. > Ligands are colored crimson. Change to suit > your needs. > > > as surface > set_color crimsom, [165,42,42]; > set_color cream, [221,203,164]; > color crimsom, org; > color cream, not org; > > remove solvent > set_color bground, [252,250,249]; > bg_color bground; > # set the view > # orient all within 8 of org > # set the lights, ray tracing setttings > # to get the Goodsell-like rendering > unset specular > set ray_trace_gain, 0 > set ray_trace_mode, 3 > bg_color white > set ray_trace_color, black > set depth_cue, 0 > #ray > png Goodsell1test.png, 1200,1200,600,1 > > > Best regards, > > Blaine > > Blaine Mooers, Ph.D. > Associate Professor > Department of Biochemistry and Molecular Biology, College of Medicine > Director of the Laboratory of Biomolecular Structure and Function > Academic Director, Biomolecular Structure Core, COBRE in Structural Biology > Full Member, Cancer Biology Program, Stephenson Cancer Center > University of Oklahoma Health Sciences Center > > Mailing Address: > 975 NE 10th Street, BRC 466 > Oklahoma City, OK 73104-5419 > Office: 405-271-8300 Lab: 405-271-8312 > > Websites: > Faculty page: > https://basicsciences.ouhsc.edu/bmb/Faculty/bio_details/mooers-blaine-hm-phd > <https://basicsciences.ouhsc.edu/bmb/Faculty/bio_details/mooers-blaine-hm-phd> > BSC-OKC (LBSF): > https://research.ouhsc.edu/Core-Facilities/Laboratory-of-Biomolecular-Structure-and-Function > > <https://research.ouhsc.edu/Core-Facilities/Laboratory-of-Biomolecular-Structure-and-Function> > COBRE in Structural Biology: https://www.ou.edu/structuralbiology > <https://www.ou.edu/structuralbiology> > From: CCP4 bulletin board <mailto:CCP4BB@JISCMAIL.AC.UK>> on behalf of Pius Padayatti > mailto:ppadaya...@gmail.com>> > Sent: Tuesday, August 15, 2023 8:24 PM > To: CCP4BB@JISCMAIL.AC.UK <mailto:CCP4BB@JISCMAIL.AC.UK> > mailto:CCP4BB@JISCMAIL.AC.UK>> > Subject: [EXTERNAL] Re: [ccp4bb] ILLUSTRATE in PYMOL > > https://pymolwiki.org/index.php/APBS > <https://urldefense.com/v3/__https://pymolwiki.org/index.php/APBS__;!!GNU8KkXDZlD12Q!9eD_ProG0wUZ-JErjGALFQIrpgJlQO_bYGkQ0_iklgY0qfFv6IblDBIQ_JwWVq4rFViNFwN_v8t_mnr6vVLzKnD4$> > Pius Padayatti > > > > > On Tue, Aug 15, 2023 at 5:20 PM khaja faisal tarique > mailto:khajafaisaltari...@gmail.com>> wrote: > Hi everyone > > Is there any way to make surface representation of a protein structure > similar to the 'Illustrate: Non-photorealistic Biomolecular Illustration' > (https://ccsb.scripps.edu/illustrate/ > <https://urldefense.com/v3/__https://ccsb.scripps.edu/illustrate/__;!!GNU8KkXDZlD12Q!9eD_ProG0wUZ-JErjGALFQIrpg
Re: [ccp4bb] [EXTERNAL] Re: [ccp4bb] ILLUSTRATE in PYMOL
Thanks all. I am almost there making similar figs as in ILLUSTRATE. It is amazing. Just wondering if we can make similar stuffs in ChimeraX ?. Faisal On Tue, 15 Aug 2023, 23:22 Jared Sampson, wrote: > Hi Faisal - > > In addition to the `specular`, `ray_trace_mode`, and `ray_trace_gain` > settings Blaine pointed out, you can also adjust the `direct` and `ambient` > lighting settings, as well as `light_count` (which I believe only affects > direct and specular lighting, not ambient). For example, these worked > pretty well for me: > > ``` > set ray_trace_mode, 3 > set ray_trace_gain, 0 > set specular, 0 > set direct, 0 > set ambient, 0.9 > ``` > > Note that you'll have to ray trace (`ray`) to see the outlines. Also it > looks like the tRNA image on the CCSB Illustrate site uses slightly > different colors for different parts of the molecule (phosphate, sugar, > base), which is a nice effect. > > Hope that helps. > > Cheers, > Jared > > > On Tue, Aug 15, 2023 at 10:40 PM Mooers, Blaine H.M. (HSC) < > blaine-moo...@ouhsc.edu> wrote: > >> Hi Faisal, >> >> I made a number of such figures several years ago. >> I finally found the code. >> >> Load the molecule of interest into PyMOL >> and paste the following code onto the command line >> just below the command history window. >> I was using our school colors: crimson and cream. >> Ligands are colored crimson. Change to suit >> your needs. >> >> >> as surface >> set_color crimsom, [165,42,42]; >> set_color cream, [221,203,164]; >> color crimsom, org; >> color cream, not org; >> >> remove solvent >> set_color bground, [252,250,249]; >> bg_color bground; >> # set the view >> # orient all within 8 of org >> # set the lights, ray tracing setttings >> # to get the Goodsell-like rendering >> unset specular >> set ray_trace_gain, 0 >> set ray_trace_mode, 3 >> bg_color white >> set ray_trace_color, black >> set depth_cue, 0 >> #ray >> png Goodsell1test.png, 1200,1200,600,1 >> >> >> Best regards, >> >> Blaine >> >> Blaine Mooers, Ph.D. >> Associate Professor >> Department of Biochemistry and Molecular Biology, College of Medicine >> Director of the Laboratory of Biomolecular Structure and Function >> Academic Director, Biomolecular Structure Core, COBRE in Structural >> Biology >> Full Member, Cancer Biology Program, Stephenson Cancer Center >> University of Oklahoma Health Sciences Center >> >> Mailing Address: >> 975 NE 10th Street, BRC 466 >> Oklahoma City, OK 73104-5419 >> Office: 405-271-8300 Lab: 405-271-8312 >> >> Websites: >> Faculty page: >> https://basicsciences.ouhsc.edu/bmb/Faculty/bio_details/mooers-blaine-hm-phd >> BSC-OKC (LBSF): >> https://research.ouhsc.edu/Core-Facilities/Laboratory-of-Biomolecular-Structure-and-Function >> COBRE in Structural Biology: https://www.ou.edu/structuralbiology >> -- >> *From:* CCP4 bulletin board on behalf of Pius >> Padayatti >> *Sent:* Tuesday, August 15, 2023 8:24 PM >> *To:* CCP4BB@JISCMAIL.AC.UK >> *Subject:* [EXTERNAL] Re: [ccp4bb] ILLUSTRATE in PYMOL >> >> https://pymolwiki.org/index.php/APBS >> <https://urldefense.com/v3/__https://pymolwiki.org/index.php/APBS__;!!GNU8KkXDZlD12Q!9eD_ProG0wUZ-JErjGALFQIrpgJlQO_bYGkQ0_iklgY0qfFv6IblDBIQ_JwWVq4rFViNFwN_v8t_mnr6vVLzKnD4$> >> *Pius Padayatti* >> >> >> >> >> On Tue, Aug 15, 2023 at 5:20 PM khaja faisal tarique < >> khajafaisaltari...@gmail.com> wrote: >> >> Hi everyone >> >> Is there any way to make surface representation of a protein structure >> similar to the 'Illustrate: Non-photorealistic Biomolecular >> Illustration' (https://ccsb.scripps.edu/illustrate/ >> <https://urldefense.com/v3/__https://ccsb.scripps.edu/illustrate/__;!!GNU8KkXDZlD12Q!9eD_ProG0wUZ-JErjGALFQIrpgJlQO_bYGkQ0_iklgY0qfFv6IblDBIQ_JwWVq4rFViNFwN_v8t_mnr6vekgjdM7$>) >> using scripts in Pymol ? It will be really helpful if someone can share >> this with me. >> >> Thanks >> >> Faisal >> >> >> -- >> >> To unsubscribe from the CCP4BB list, click the following link: >> https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB=1 >> <https://urldefense.com/v3/__https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB=1__;!!GNU8KkXDZlD12Q!9eD_ProG0wUZ-JErjGALFQIrpgJlQO_bYGkQ0_iklgY0qfFv6IblDBIQ_JwWVq4rFViNFwN_v8t_mnr6vZS2nRni$> >> >> >> --
Re: [ccp4bb] [EXTERNAL] Re: [ccp4bb] ILLUSTRATE in PYMOL
Hi Faisal - In addition to the `specular`, `ray_trace_mode`, and `ray_trace_gain` settings Blaine pointed out, you can also adjust the `direct` and `ambient` lighting settings, as well as `light_count` (which I believe only affects direct and specular lighting, not ambient). For example, these worked pretty well for me: ``` set ray_trace_mode, 3 set ray_trace_gain, 0 set specular, 0 set direct, 0 set ambient, 0.9 ``` Note that you'll have to ray trace (`ray`) to see the outlines. Also it looks like the tRNA image on the CCSB Illustrate site uses slightly different colors for different parts of the molecule (phosphate, sugar, base), which is a nice effect. Hope that helps. Cheers, Jared On Tue, Aug 15, 2023 at 10:40 PM Mooers, Blaine H.M. (HSC) < blaine-moo...@ouhsc.edu> wrote: > Hi Faisal, > > I made a number of such figures several years ago. > I finally found the code. > > Load the molecule of interest into PyMOL > and paste the following code onto the command line > just below the command history window. > I was using our school colors: crimson and cream. > Ligands are colored crimson. Change to suit > your needs. > > > as surface > set_color crimsom, [165,42,42]; > set_color cream, [221,203,164]; > color crimsom, org; > color cream, not org; > > remove solvent > set_color bground, [252,250,249]; > bg_color bground; > # set the view > # orient all within 8 of org > # set the lights, ray tracing setttings > # to get the Goodsell-like rendering > unset specular > set ray_trace_gain, 0 > set ray_trace_mode, 3 > bg_color white > set ray_trace_color, black > set depth_cue, 0 > #ray > png Goodsell1test.png, 1200,1200,600,1 > > > Best regards, > > Blaine > > Blaine Mooers, Ph.D. > Associate Professor > Department of Biochemistry and Molecular Biology, College of Medicine > Director of the Laboratory of Biomolecular Structure and Function > Academic Director, Biomolecular Structure Core, COBRE in Structural Biology > Full Member, Cancer Biology Program, Stephenson Cancer Center > University of Oklahoma Health Sciences Center > > Mailing Address: > 975 NE 10th Street, BRC 466 > Oklahoma City, OK 73104-5419 > Office: 405-271-8300 Lab: 405-271-8312 > > Websites: > Faculty page: > https://basicsciences.ouhsc.edu/bmb/Faculty/bio_details/mooers-blaine-hm-phd > BSC-OKC (LBSF): > https://research.ouhsc.edu/Core-Facilities/Laboratory-of-Biomolecular-Structure-and-Function > COBRE in Structural Biology: https://www.ou.edu/structuralbiology > ------------------ > *From:* CCP4 bulletin board on behalf of Pius > Padayatti > *Sent:* Tuesday, August 15, 2023 8:24 PM > *To:* CCP4BB@JISCMAIL.AC.UK > *Subject:* [EXTERNAL] Re: [ccp4bb] ILLUSTRATE in PYMOL > > https://pymolwiki.org/index.php/APBS > <https://urldefense.com/v3/__https://pymolwiki.org/index.php/APBS__;!!GNU8KkXDZlD12Q!9eD_ProG0wUZ-JErjGALFQIrpgJlQO_bYGkQ0_iklgY0qfFv6IblDBIQ_JwWVq4rFViNFwN_v8t_mnr6vVLzKnD4$> > *Pius Padayatti* > > > > > On Tue, Aug 15, 2023 at 5:20 PM khaja faisal tarique < > khajafaisaltari...@gmail.com> wrote: > > Hi everyone > > Is there any way to make surface representation of a protein structure > similar to the 'Illustrate: Non-photorealistic Biomolecular Illustration' > (https://ccsb.scripps.edu/illustrate/ > <https://urldefense.com/v3/__https://ccsb.scripps.edu/illustrate/__;!!GNU8KkXDZlD12Q!9eD_ProG0wUZ-JErjGALFQIrpgJlQO_bYGkQ0_iklgY0qfFv6IblDBIQ_JwWVq4rFViNFwN_v8t_mnr6vekgjdM7$>) > using scripts in Pymol ? It will be really helpful if someone can share > this with me. > > Thanks > > Faisal > > > -- > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB=1 > <https://urldefense.com/v3/__https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB=1__;!!GNU8KkXDZlD12Q!9eD_ProG0wUZ-JErjGALFQIrpgJlQO_bYGkQ0_iklgY0qfFv6IblDBIQ_JwWVq4rFViNFwN_v8t_mnr6vZS2nRni$> > > > -- > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB=1 > <https://urldefense.com/v3/__https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB=1__;!!GNU8KkXDZlD12Q!9eD_ProG0wUZ-JErjGALFQIrpgJlQO_bYGkQ0_iklgY0qfFv6IblDBIQ_JwWVq4rFViNFwN_v8t_mnr6vZS2nRni$> > > -- > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB=1 > To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
Re: [ccp4bb] [EXTERNAL] Re: [ccp4bb] ILLUSTRATE in PYMOL
Hi Faisal, I made a number of such figures several years ago. I finally found the code. Load the molecule of interest into PyMOL and paste the following code onto the command line just below the command history window. I was using our school colors: crimson and cream. Ligands are colored crimson. Change to suit your needs. as surface set_color crimsom, [165,42,42]; set_color cream, [221,203,164]; color crimsom, org; color cream, not org; remove solvent set_color bground, [252,250,249]; bg_color bground; # set the view # orient all within 8 of org # set the lights, ray tracing setttings # to get the Goodsell-like rendering unset specular set ray_trace_gain, 0 set ray_trace_mode, 3 bg_color white set ray_trace_color, black set depth_cue, 0 #ray png Goodsell1test.png, 1200,1200,600,1 Best regards, Blaine Blaine Mooers, Ph.D. Associate Professor Department of Biochemistry and Molecular Biology, College of Medicine Director of the Laboratory of Biomolecular Structure and Function Academic Director, Biomolecular Structure Core, COBRE in Structural Biology Full Member, Cancer Biology Program, Stephenson Cancer Center University of Oklahoma Health Sciences Center Mailing Address: 975 NE 10th Street, BRC 466 Oklahoma City, OK 73104-5419 Office: 405-271-8300 Lab: 405-271-8312 Websites: Faculty page: https://basicsciences.ouhsc.edu/bmb/Faculty/bio_details/mooers-blaine-hm-phd BSC-OKC (LBSF): https://research.ouhsc.edu/Core-Facilities/Laboratory-of-Biomolecular-Structure-and-Function COBRE in Structural Biology: https://www.ou.edu/structuralbiology From: CCP4 bulletin board on behalf of Pius Padayatti Sent: Tuesday, August 15, 2023 8:24 PM To: CCP4BB@JISCMAIL.AC.UK Subject: [EXTERNAL] Re: [ccp4bb] ILLUSTRATE in PYMOL https://pymolwiki.org/index.php/APBS<https://urldefense.com/v3/__https://pymolwiki.org/index.php/APBS__;!!GNU8KkXDZlD12Q!9eD_ProG0wUZ-JErjGALFQIrpgJlQO_bYGkQ0_iklgY0qfFv6IblDBIQ_JwWVq4rFViNFwN_v8t_mnr6vVLzKnD4$> Pius Padayatti On Tue, Aug 15, 2023 at 5:20 PM khaja faisal tarique mailto:khajafaisaltari...@gmail.com>> wrote: Hi everyone Is there any way to make surface representation of a protein structure similar to the 'Illustrate: Non-photorealistic Biomolecular Illustration' (https://ccsb.scripps.edu/illustrate/<https://urldefense.com/v3/__https://ccsb.scripps.edu/illustrate/__;!!GNU8KkXDZlD12Q!9eD_ProG0wUZ-JErjGALFQIrpgJlQO_bYGkQ0_iklgY0qfFv6IblDBIQ_JwWVq4rFViNFwN_v8t_mnr6vekgjdM7$>) using scripts in Pymol ? It will be really helpful if someone can share this with me. Thanks Faisal To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB=1<https://urldefense.com/v3/__https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB=1__;!!GNU8KkXDZlD12Q!9eD_ProG0wUZ-JErjGALFQIrpgJlQO_bYGkQ0_iklgY0qfFv6IblDBIQ_JwWVq4rFViNFwN_v8t_mnr6vZS2nRni$> To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB=1<https://urldefense.com/v3/__https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB=1__;!!GNU8KkXDZlD12Q!9eD_ProG0wUZ-JErjGALFQIrpgJlQO_bYGkQ0_iklgY0qfFv6IblDBIQ_JwWVq4rFViNFwN_v8t_mnr6vZS2nRni$> To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/