Re: [ccp4bb] 27.5% R/29% Rfree for 1.75A structure (details updated)

2008-07-30 Thread Daniel Schlieper
Dear Jinjin Zhang, what happens if you treat your data as perfect twin? Maybe you do have a twin after all. Best regards, Daniel -- Daniel Schlieper email: [EMAIL PROTECTED] Molecular Motors Group phone: +44 1883 722306 (x 305) Marie Curie Research Institute

Re: [ccp4bb] 27.5% R/29% Rfree for 1.75A structure (details updated)

2008-07-30 Thread Chavas Leo
Dear Jinjin Zhang -- On 29 Jul 2008, at 22:34, JINJIN ZHANG wrote: 1. Protein 100 aa, peptide 6 aa, co-crystalized 2. Space group: P43212. Overall R-fac: 0.03. Redundancy: >5 for 98% of reflections. B-factor:55 3. CNS refinement 4. Phenix xtriage checked, no twinning is suspected. 5. Water mo

Re: [ccp4bb] 27.5% R/29% Rfree for 1.75A structure (details updated)

2008-07-29 Thread Stuart Endo-Streeter
How are you deciding your resolution limit? I/sigma, Rmrgd-F, Rmeas, etc. etc.? We recently had a person in a fellow lab that couldn't figure why their R/Rfree was mid- to high-twenties for their 1.8 angstrom structure. Turned out the data stopped at 2.1. Stuart On Tuesday 29 July 2008 17:3

[ccp4bb] 27.5% R/29% Rfree for 1.75A structure (details updated)

2008-07-29 Thread JINJIN ZHANG
Dear All, Here are updated details for the high R problem of my 1.75A structure.  1. Protein 100 aa, peptide 6 aa, co-crystalized 2. Space group: P43212. Overall R-fac: 0.03. Redundancy: >5 for 98% of reflections. B-factor:55 3. CNS refinement 4. Phenix xtriage checked, no twinning is suspecte

Re: [ccp4bb] 27.5% R/29% Rfree for 1.75A structure (details updated)

2008-07-29 Thread Van Den Berg, Bert
(office); 508 856 1211 (lab) e-mail: [EMAIL PROTECTED] http://www.umassmed.edu/pmm/faculty/vandenberg.cfm From: CCP4 bulletin board on behalf of JINJIN ZHANG Sent: Tue 7/29/2008 5:24 PM To: CCP4BB@JISCMAIL.AC.UK Subject: [ccp4bb] 27.5% R/29% Rfree for 1.75A structure

[ccp4bb] 27.5% R/29% Rfree for 1.75A structure (details updated)

2008-07-29 Thread JINJIN ZHANG
Dear All, Here are updated details for the high R problem of my 1.75A structure.  1. Protein 100 aa, peptide 6 aa, co-crystalized 2. Space group: P43212. Overall R-fac: 0.3. Redundancy: >5 for 98% of reflections. B-factor:55 3. CNS refinement 4. Phenix xtriage checked, no twinning is suspected