Re: [ccp4bb] Clear segid
This should work in latest nightly builds: phenix.pdbtools model.pdb clear_seg_id=true If it doesn't please report a bug (on appropriate Phenix lists). Good luck! Pavel On Thu, Jul 5, 2018 at 4:33 AM, Eugene Osipov wrote: > Hello everyone, > is there any simple way in CCP4 to clear segid field? > I used phenix.pdbtools but version 1.13 does not work anymore. > > -- > Eugene Osipov > Junior Research Scientist > Laboratory of Enzyme Engineering > Research Center of Biotechnology > Russian Academy of Sciences > Leninsky pr. 33, 119071 Moscow, Russia > e-mail: e.m.osi...@gmail.com > > -- > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1 > To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1
Re: [ccp4bb] Clear segid
I found the solution by myself: open pdb file in vim and replace segid by regexp :%s/\S\S\S\s\s\(\S$\)/ \1/g 2018-07-05 14:33 GMT+03:00 Eugene Osipov : > Hello everyone, > is there any simple way in CCP4 to clear segid field? > I used phenix.pdbtools but version 1.13 does not work anymore. > > -- > Eugene Osipov > Junior Research Scientist > Laboratory of Enzyme Engineering > Research Center of Biotechnology > Russian Academy of Sciences > Leninsky pr. 33, 119071 Moscow, Russia > e-mail: e.m.osi...@gmail.com > -- Eugene Osipov Junior Research Scientist Laboratory of Enzyme Engineering Research Center of Biotechnology Russian Academy of Sciences Leninsky pr. 33, 119071 Moscow, Russia e-mail: e.m.osi...@gmail.com To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1
[ccp4bb] Clear segid
Hello everyone, is there any simple way in CCP4 to clear segid field? I used phenix.pdbtools but version 1.13 does not work anymore. -- Eugene Osipov Junior Research Scientist Laboratory of Enzyme Engineering Research Center of Biotechnology Russian Academy of Sciences Leninsky pr. 33, 119071 Moscow, Russia e-mail: e.m.osi...@gmail.com To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1
