Re: [ccp4bb] Glycoprotein expression question

2017-04-12 Thread Zhijie Li
Hi Bernhard, I guess you knew all these and is really asking for people's experience, but please excuse me to start from the theory: N-glycans in eukaryotes are known to be involved in glycoprotein folding in the ER. They allow the nascent protein to get into the calnexin/calreticulin cycle

[ccp4bb] Fwd: Re: [ccp4bb] Glycoprotein expression question

2017-04-12 Thread radu
t;From: CCP4 bulletin board <CCP4BB@JISCMAIL.AC.UK> (on behalf of Savvas Savvides <savvas.savvi...@ugent.be>) >Subject: Re: [ccp4bb] Glycoprotein expression question >To: CCP4BB@JISCMAIL.AC.UK > >Dear Bernhard >Our campaigns over the years aiming to produce mammal

Re: [ccp4bb] Glycoprotein expression question

2017-04-12 Thread Savvas Savvides
Dear Bernhard Our campaigns over the years aiming to produce mammalian cytokines and the ectodomains of cytokine receptors via eukaryotic expression systems (mainly in several HEK293 flavors) for structural biology, have taught us that the N-linked glycosylation issue remains a very empirical

Re: [ccp4bb] Glycoprotein expression question

2017-04-12 Thread Adriana Erica Miele
Good morning, Bernhard, I do not think that you had pure luck (though serendipity helps a lot). You said that the PNGaseF treated protein was indeed stable, that was already a good hint. In my little experience with N- and O-glycoproteins, with not a high percentage of sugar content, I saw a

Re: [ccp4bb] Glycoprotein expression question

2017-04-12 Thread Goldman, Adrian
I think it completely depends on the protein: in some proteins, they are required for folding; in some (eg Fcs), they are not required for folding but for function); in some, some of them are required and others not; in some they are required _during_ folding, but afterwards they can be removed

Re: [ccp4bb] Glycoprotein expression question

2017-04-12 Thread Jan Dohnalek
We had experience with a relatively small glycoprotein - when glycosylation sites were deleted, solubility went drastically down - we could not express soluble any more. Back to eukaryotic expression system which worked. So may be you were really lucky. Jan On Tue, Apr 11, 2017 at 10:34 PM,

[ccp4bb] Glycoprotein expression question

2017-04-11 Thread Bernhard Rupp
Hi Fellows, a humble question for our glyco-expressionists: I have mutated out the Asns of the N-glycoslation consensus sites for Asp (Asp simply because the PNGaseF treated protein stays stable so I thought that might be a good guess) and indeed the unglycosilated mutant expresses