[ccp4bb] Is there an alternative to Java to view the (nice) plots in ccp4i ?
Hello,
I think the Subject line tells it all.
Former Linux box, Java was installed within a couple of browsers and I
could view the (nice and useful) plots within ccp4i.
New Linux box, Java {plugin / extension / whatever} is deactivated to
start with (this Java plugin seems rather difficult to install, whatever
I have tried has failed so far) with a message indicating that Java is a
security risk.
Hence I was wondering if there is an alternative to view these nice
plots on a Linux box nowadays. Something that would not be seen as a
security threat and be deactivated.
Thanks in advance,
Fred.
--
Fred. Vellieux (B.Sc., Ph.D., hdr)
ouvrier de la recherche
IBS / ELMA
41 rue Jules Horowitz
F-38027 Grenoble Cedex 01
Tel: +33 438789605
Fax: +33 438785494
Re: [ccp4bb] Is there an alternative to Java to view the (nice) plots in ccp4i ?
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Hello Fred,
if you double-click on a job in ccp4i, the results should be shown by
qtRview, the new log-viewer of ccp4. It shows the graphs, and you do
not need java (not even a web-browser).
Regards,
Tim
On 03/08/2013 01:56 PM, vellieux wrote:
Hello,
I think the Subject line tells it all.
Former Linux box, Java was installed within a couple of browsers
and I could view the (nice and useful) plots within ccp4i.
New Linux box, Java {plugin / extension / whatever} is deactivated
to start with (this Java plugin seems rather difficult to install,
whatever I have tried has failed so far) with a message indicating
that Java is a security risk.
Hence I was wondering if there is an alternative to view these
nice plots on a Linux box nowadays. Something that would not be
seen as a security threat and be deactivated.
Thanks in advance,
Fred.
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
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Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org/
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z1CYncAcxTaRlX1YJERE5a8=
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Re: [ccp4bb] Is there an alternative to Java to view the (nice) plots in ccp4i ?
Two months ago, CCP4 deployed a new viewer for annotated result reports (plots
etc), which does not depend on browsers and java, exactly for reasons that you
write about. Do you use 6.3.0 with updates, and if yes, does your question mean
that the new viewer does not work for you? The viewer (QtRView) was released in
6.3.0-010 already integrated with ccp4i.
Eugene
On 8 Mar 2013, at 12:56, vellieux wrote:
Hello,
I think the Subject line tells it all.
Former Linux box, Java was installed within a couple of browsers and I could
view the (nice and useful) plots within ccp4i.
New Linux box, Java {plugin / extension / whatever} is deactivated to start
with (this Java plugin seems rather difficult to install, whatever I have
tried has failed so far) with a message indicating that Java is a security
risk.
Hence I was wondering if there is an alternative to view these nice plots on
a Linux box nowadays. Something that would not be seen as a security threat
and be deactivated.
Thanks in advance,
Fred.
--
Fred. Vellieux (B.Sc., Ph.D., hdr)
ouvrier de la recherche
IBS / ELMA
41 rue Jules Horowitz
F-38027 Grenoble Cedex 01
Tel: +33 438789605
Fax: +33 438785494
--
Scanned by iCritical.
Re: [ccp4bb] Is there an alternative to Java to view the (nice) plots in ccp4i ?
Hello,
Indeed there is a new viewer and it usually works.
But I also have pre 6.3.0 results that I need to view and somehow the
ccp4i qtRviewer does not manage to load the results...
So I was wondering if there was a Java-free alternative, I do have the
log files.
Fred.
On 08/03/13 14:04, eugene.krissi...@stfc.ac.uk wrote:
Two months ago, CCP4 deployed a new viewer for annotated result reports (plots
etc), which does not depend on browsers and java, exactly for reasons that you
write about. Do you use 6.3.0 with updates, and if yes, does your question mean
that the new viewer does not work for you? The viewer (QtRView) was released in
6.3.0-010 already integrated with ccp4i.
Eugene
On 8 Mar 2013, at 12:56, vellieux wrote:
Hello,
I think the Subject line tells it all.
Former Linux box, Java was installed within a couple of browsers and I could
view the (nice and useful) plots within ccp4i.
New Linux box, Java {plugin / extension / whatever} is deactivated to start
with (this Java plugin seems rather difficult to install, whatever I have tried
has failed so far) with a message indicating that Java is a security risk.
Hence I was wondering if there is an alternative to view these nice plots on a
Linux box nowadays. Something that would not be seen as a security threat and
be deactivated.
Thanks in advance,
Fred.
--
Fred. Vellieux (B.Sc., Ph.D., hdr)
ouvrier de la recherche
IBS / ELMA
41 rue Jules Horowitz
F-38027 Grenoble Cedex 01
Tel: +33 438789605
Fax: +33 438785494
--
Fred. Vellieux (B.Sc., Ph.D., hdr)
ouvrier de la recherche
IBS / ELMA
41 rue Jules Horowitz
F-38027 Grenoble Cedex 01
Tel: +33 438789605
Fax: +33 438785494
Re: [ccp4bb] Is there an alternative to Java to view the (nice) plots in ccp4i ?
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Hash: SHA1
how about loggraph, or vi+gnuplot?
Tim
On 03/08/2013 02:12 PM, vellieux wrote:
Hello,
Indeed there is a new viewer and it usually works.
But I also have pre 6.3.0 results that I need to view and somehow
the ccp4i qtRviewer does not manage to load the results...
So I was wondering if there was a Java-free alternative, I do have
the log files.
Fred.
On 08/03/13 14:04, eugene.krissi...@stfc.ac.uk wrote:
Two months ago, CCP4 deployed a new viewer for annotated result
reports (plots etc), which does not depend on browsers and java,
exactly for reasons that you write about. Do you use 6.3.0 with
updates, and if yes, does your question mean that the new viewer
does not work for you? The viewer (QtRView) was released in
6.3.0-010 already integrated with ccp4i.
Eugene
On 8 Mar 2013, at 12:56, vellieux wrote:
Hello,
I think the Subject line tells it all.
Former Linux box, Java was installed within a couple of
browsers and I could view the (nice and useful) plots within
ccp4i.
New Linux box, Java {plugin / extension / whatever} is
deactivated to start with (this Java plugin seems rather
difficult to install, whatever I have tried has failed so far)
with a message indicating that Java is a security risk.
Hence I was wondering if there is an alternative to view these
nice plots on a Linux box nowadays. Something that would not be
seen as a security threat and be deactivated.
Thanks in advance,
Fred.
-- Fred. Vellieux (B.Sc., Ph.D., hdr) ouvrier de la recherche
IBS / ELMA 41 rue Jules Horowitz F-38027 Grenoble Cedex 01 Tel:
+33 438789605 Fax: +33 438785494
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
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Re: [ccp4bb] Is there an alternative to Java to view the (nice) plots in ccp4i ?
Indeed there is a new viewer and it usually works.
it would be nice to have specific feedback where it does not, against previous,
browser-based, system
But I also have pre 6.3.0 results that I need to view and somehow the ccp4i
qtRviewer does not manage to load the results...
I would think that they should be viewable with QtRView as long as you use
6.3.0 ... we have this tested, but certainly something may have been
overlooked. This assumes, of course, that your pre-6.3.0 projects are now in
6.3.0
So I was wondering if there was a Java-free alternative, I do have the log
files.
Like using old Linuxes to work with old projects? :) If you can give a specific
example where QtRView fails on log files in projects imported into 6.3.0 from
pre-6.3.0 projects, we can have a look into that.
Eugene
Fred.
On 08/03/13 14:04, eugene.krissi...@stfc.ac.uk wrote:
Two months ago, CCP4 deployed a new viewer for annotated result reports
(plots etc), which does not depend on browsers and java, exactly for reasons
that you write about. Do you use 6.3.0 with updates, and if yes, does your
question mean that the new viewer does not work for you? The viewer
(QtRView) was released in 6.3.0-010 already integrated with ccp4i.
Eugene
On 8 Mar 2013, at 12:56, vellieux wrote:
Hello,
I think the Subject line tells it all.
Former Linux box, Java was installed within a couple of browsers and I
could view the (nice and useful) plots within ccp4i.
New Linux box, Java {plugin / extension / whatever} is deactivated to start
with (this Java plugin seems rather difficult to install, whatever I have
tried has failed so far) with a message indicating that Java is a security
risk.
Hence I was wondering if there is an alternative to view these nice plots
on a Linux box nowadays. Something that would not be seen as a security
threat and be deactivated.
Thanks in advance,
Fred.
--
Fred. Vellieux (B.Sc., Ph.D., hdr)
ouvrier de la recherche
IBS / ELMA
41 rue Jules Horowitz
F-38027 Grenoble Cedex 01
Tel: +33 438789605
Fax: +33 438785494
--
Fred. Vellieux (B.Sc., Ph.D., hdr)
ouvrier de la recherche
IBS / ELMA
41 rue Jules Horowitz
F-38027 Grenoble Cedex 01
Tel: +33 438789605
Fax: +33 438785494
--
Scanned by iCritical.
