k
Tel: (+44) - 1865 - 287783
Original message
>Date: Wed, 26 Oct 2016 17:46:15 +0200
>From: CCP4 bulletin board (on behalf of George
>Sheldrick )
>Subject: Re: [ccp4bb] New version SHELXL 2016/6 and PDB2INS
>To: CCP4BB@JISCMAIL.AC.UK
>
>Dear Kay,
>
>Exactly. T
Dear Kay,
Exactly. That is why we provided two Linux versions (called pdb2ins and
pdb2ins_oldlinux) on the SHELX server.
So far two versions seem to be enough and for Macs and Windows only one
version seems to be required. If
anyone finds this to be insufficient, please let Anna know giving
de
In line with Kay's message this sounds like pdb2ins having being linked
statically with glibc.
AFAIK this can be problematic since glibc in reality can never be
completely statically linked. This may cause version conflicts if the
same version of glibc is not present on the users system. To avoi
Hi Phil,
the error message occurs because your glibc is too old for this binary. The
glibc cannot easily be updated, it is tied to the distribution, in your case
RHEL6. A newer kernel does not change this, nor would an update to RHEL 6.8
This is why distributed Linux software should be built on
Dear Phil,
as far as I understand, SL version 6 builds on kernel 2.6.32, which was
released nearly a decade ago. Maybe it's time to update?
Even the rather conservative Debian stable uses 3.16 ...
Best,
Tim
On Wednesday, October 26, 2016 12:11:25 PM Phil Evans wrote:
> Hi George
>
> I’m not s
Dear Phil,
Thank you for the information.
We made two versions for Linux available;
one packaged on an up-to-date Linux computer and one from an 'older'
system.
Should there be a library problem with the 'linux' version, the
'oldllinux' version could work.
best wishes,
Anna
On 10/26/2016 12
r de Investigaciones Científicas
Spanish National Research Council
-Mensaje original-
De: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] En nombre de Phil
Evans
Enviado el: miércoles, 26 de octubre de 2016 13:11
Para: CCP4BB@JISCMAIL.AC.UK
Asunto: Re: [ccp4bb] New version SHELXL 2016/6 and PDB
Hi George
I’m not sure that anyone here is using shelxl but I’ve just updated our general
64-bit Linux versions anyway. shell starts OK, but with pdb2ins I get a
complaint. Do you understand this? (I should probably ask our local guys)
Our system is
Scientific Linux release 6.7 (Carbon)
./pdb
SHELXL may be used to refine both small and macromolecular structures
against X-ray or neutron diffraction data, including non-merohedral
twins. A new version 2016/6 of SHELXL may now be downloaded from the
SHELX server. It has been well tested by about 20 volunteers to whom I
am very grateful.
