Re: [ccp4bb] Problem downloading models maps in from PDBe in Coot

[Paul Emsley]

Hopefully 0.9.8.4 should fix that.

Paul.

On 16/09/2022 13:54, Jan Dohnalek wrote:

This has been quite variable in (several?) last versions of Coot.
I have some three latest versions available and when one does not work 
I start another one. Sad but true.


Jan


On Thu, Sep 15, 2022 at 11:39 AM Robbie Joosten 
 wrote:


Not sure if this is a PDBe bug or a Coot bug (or a combination
thereof)...

I'm using the latest WinCoot in CCP4 8.0. When I try to 'Fetch PDB
using Accession Code', I do not get any models so I guess the
target URL is wrong.
When I use Fetch PDB & Map using EDS, I sometimes get a map (1cbs,
3fvl), sometimes I don't (1ctn, 1lee and many more). All of these
maps used to be available and PDB-REDO versions of all these
entries exist. Does anyone know what is going on?

Cheers,
Robbie



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--
Jan Dohnalek, Ph.D
Institute of Biotechnology
Academy of Sciences of the Czech Republic
Biocev
Prumyslova 595
252 50 Vestec near Prague
Czech Republic

Tel. +420 325 873 758



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Re: [ccp4bb] Problem downloading models maps in from PDBe in Coot

[Jan Dohnalek]

This has been quite variable in (several?) last versions of Coot.
I have some three latest versions available and when one does not work I
start another one. Sad but true.

Jan


On Thu, Sep 15, 2022 at 11:39 AM Robbie Joosten 
wrote:

> Not sure if this is a PDBe bug or a Coot bug (or a combination thereof)...
>
> I'm using the latest WinCoot in CCP4 8.0. When I try to 'Fetch PDB using
> Accession Code', I do not get any models so I guess the target URL is
> wrong.
> When I use Fetch PDB & Map using EDS, I sometimes get a map (1cbs, 3fvl),
> sometimes I don't (1ctn, 1lee and many more). All of these maps used to be
> available and PDB-REDO versions of all these entries exist. Does anyone
> know what is going on?
>
> Cheers,
> Robbie
>
> 
>
> To unsubscribe from the CCP4BB list, click the following link:
> https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB=1
>
> This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a
> mailing list hosted by www.jiscmail.ac.uk, terms & conditions are
> available at https://www.jiscmail.ac.uk/policyandsecurity/
>


-- 
Jan Dohnalek, Ph.D
Institute of Biotechnology
Academy of Sciences of the Czech Republic
Biocev
Prumyslova 595
252 50 Vestec near Prague
Czech Republic

Tel. +420 325 873 758



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[ccp4bb] Problem downloading models maps in from PDBe in Coot

[Robbie Joosten]

Not sure if this is a PDBe bug or a Coot bug (or a combination thereof)...

I'm using the latest WinCoot in CCP4 8.0. When I try to 'Fetch PDB using 
Accession Code', I do not get any models so I guess the target URL is wrong. 
When I use Fetch PDB & Map using EDS, I sometimes get a map (1cbs, 3fvl), 
sometimes I don't (1ctn, 1lee and many more). All of these maps used to be 
available and PDB-REDO versions of all these entries exist. Does anyone know 
what is going on?

Cheers,
Robbie



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