Re: [ccp4bb] Real Space Refine Zone for Ligand

2012-04-16 Thread jens Preben Morth
Hi Dipankar you need to pit a unique identifier for each of your ligands, eg phenix.elbow --smiles=cyclopiazonic_acid.smi --id=CZA --output=cza --opt best Preben On 4/16/12 4:52 AM, Dipankar Manna wrote: Dear Crystallographers, After one round of refinement (restrained refinement) with

Re: [ccp4bb] Real Space Refine Zone for Ligand

2012-04-16 Thread Paul Emsley
On 16/04/12 03:52, Dipankar Manna wrote: Dear Crystallographers, After one round of refinement (restrained refinement) with ligand, I inport the .cif file through '-Import CIF Dictionary' into Coot. But when I am going for '-Real Space Refine Zone' for the ligand, its showing Refinement set

[ccp4bb] Real Space Refine Zone for Ligand

2012-04-15 Thread Dipankar Manna
Dear Crystallographers, After one round of refinement (restrained refinement) with ligand, I inport the .cif file through '-Import CIF Dictionary' into Coot. But when I am going for '-Real Space Refine Zone' for the ligand, its showing Refinement set up failure. Failed to find restrained for: