Dear All
I have a data at 2.75A. I process it in Space group P3121, using HKL3000.
Run a molrep,find three molecule in a unit cell. I am trying to refine it
with phenix, the R and R-free stuck at 34 and 41 respectively.
Crystal: The crystal seems multiple thin plates and I tried to freeze the
Hi Bashir,
if you send me the data and model (directly to my email address, not the
whole list), then I will have a look.
Also, please note there is Phenix mailing list for Phenix specific
questions.
Pavel
On Fri, Feb 15, 2013 at 12:35 PM, Muhammed bashir Khan
A very likely possibility (but there may be others) is merohedral
twinning, which can and often does occur in this space group, and these
are typical R-values you would get stuck to in case of partial
merohedral twinning. Checking the log file of truncate should be
informative in this respect.
I plan to just clean up the data.
Hello Everyone,
We are computationally averaging several homologous protein structures into a
single structure. This of course will lead to a single protein structure that
possesses poor biophysical characteristics of bond lengths, bond angles, steric
hindrance, etc. Therefore, we will need a
On Mon, Jul 23, 2012 at 9:50 AM, Scott Foy s...@mail.umkc.edu wrote:
We are computationally averaging several homologous protein structures into a
single structure. This of course will lead to a single protein structure that
possesses poor biophysical characteristics of bond lengths, bond
Scott,
you are asking for opinions when you should be asking for hard data.
CNS, refmac and phenix all can regularize a structural model. If your
primary consideration is speed, you should simply try all three and
compare cpu time.
Cheers,
Ed.
On 07/23/2012 12:50 PM, Scott Foy wrote:
Dear All,
Do you need some help for structure refinement or structure analysis?
I will be very happy to work for you, while I am looking for next
position.
To me, solving structure is a puzzle game and for fun.
Regards,
Kevin Jin
