[ccp4bb] To build ssDNA to base pair with the other strand of DNA in coot

2013-05-29 Thread Wei Shi
Hi all,
I am working on solving the crystal structure of a protein-DNA complex. I
could complete one strand of the DNA to fit the electron density using
Coot, but for the other strand, the density for several bases at each end
of the DNA is not clear and it's missing several bases at each end of the
DNA. I am wondering whether there is a function I could use to build the
missing bases in one strand of the DNA to base pair with the other strand
of DNA which is complete and without the need to fit the density (since the
density for those several bases are not very clear). Thank you so much!

Best,
Wei


Re: [ccp4bb] To build ssDNA to base pair with the other strand of DNA in coot

2013-05-29 Thread Ed Pozharski
 I am wondering whether there is a function I could use to build the
 missing bases in one strand of the DNA to base pair with the other
 strand of DNA which is complete...

Calculate-Other modeling tools- Base pair...

-- 
Coot verendus est