Re: [ccp4bb] metal chelation

2014-05-19 Thread Roger Rowlett
Adam, We developed a protocol (loosely based on a few previous literature reports) for metallo-substitution of beta-carbonic anhydrase (a zinc-metalloenzyme) with cobalt(II). The metal ion in this enzyme is extremely refractory toward extraction with chelators, and the protein will not denatu

Re: [ccp4bb] metal chelation

2014-05-19 Thread Nadir T. Mrabet
Hi Adam, I have not read all the thread as it came all at once and late (9:00pm here). I believe the best way to strip a protein of metals is to first adsorb it onto a solid support (e.g. IEX) and then use a sufficiently low-pH (say equal or below 6) buffer that contains also EDTA. You will pr

Re: [ccp4bb] metal chelation

2014-05-19 Thread Adam Brummett
Thank you everyone for the comments and suggestions. To answer a few questions: -I do not use a treated buffer system. I have just used the nano-pure water. I have looked into Chelex, but before I bought it I wanted to see if you all recommended it. I was trying to avoid this, but it may not be

Re: [ccp4bb] metal chelation

2014-05-19 Thread Roger Rowlett
The answer depends on a number of questions: * What metal ion are you trying to eliminate? * What kind of metal-binding site is involved? o A peripheral or loose binding site? (e.g. surface calcium ions)--these may respond to chelators o An active site coordinated metal? (e.g.,

Re: [ccp4bb] metal chelation

2014-05-19 Thread Tim Gruene
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Dear Adam, - - many plasmids for His-tags contain a cleavage site to remove the tag. In fact this provides you with an additional purifiction step which is complementary to the first Ni-column and therefore quite a good strategy (in addition to chop

Re: [ccp4bb] metal chelation

2014-05-19 Thread nathanielclar5 .
Are you treating all your buffers with metal chelating resin? Are you washing all plasticware with EDTA and metal-free buffer prior to use? How are you quantifying your metal content, and what metal ions are contaminating your sample? You might be pulling out the metal ions, but they get right b

[ccp4bb] metal chelation

2014-05-19 Thread SUBSCRIBE CCP4BB Adam Brummett
Hello All, I apologize for the non-crystal related question. I am trying to get a fully metal-free apo enzyme. The 6x His construct is consistently purified with some metal (20-30%). I have attempted chelating away the metal with up to 30 mM EDTA and DFO and then dialyzing it away, but this h