Hi Reza,
The equivalent for UNK (not ALA!) is residue N for RNA and DN for DNA.
HTH,
Robbie
> -Original Message-
> From: CCP4 bulletin board On Behalf Of Reza
> Khayat
> Sent: Saturday, March 13, 2021 14:53
> To: CCP4BB@JISCMAIL.AC.UK
> Subject: [ccp4bb] poly-dN model
>
> Hi,
>
>
>
Hi,
For DNA/RNA models, is there an equivalent to a poly-Ala model? Something like
a poly-dN perhaps? This is in case you don't know the nucleic acid sequence.
Thanks.
Best wishes,
Reza
Reza Khayat, PhD
Associate Professor
City College of New York
Department of Chemistry and Biochemistry
Thank you Robbie.
Reza Khayat, PhD
Associate Professor
City College of New York
Department of Chemistry and Biochemistry
New York, NY 10031
From: CCP4 bulletin board on behalf of Robbie Joosten
Sent: Saturday, March 13, 2021 9:09 AM
To:
Hi Reza,
If you are looking for a molecular replacement model, we typically use
single-stranded or double-stranded poly-uridine, which you can generate with
Coot.
Best,
-Jinwei
-
Jinwei Zhang
Laboratory of Molecular Biology
NIDDK, NIH
50 South
