[ccp4bb] Two open PhD positions biochemistry/xtallography at the Ruhr-University Bochum / University Kaiserlautern, Germany

and contact details of at least two referees, to Prof. Dr. Nicole Frankenberg-Dinkel (nicole.frankenb...@rub.de) and Prof. Dr. Eckhard Hofmann (eckhard.hofm...@bph.rub.de). The exact salary will depend on the personal qualification of the applicant up to 65 % E 13 TV-L. The Ruhr University Bochum

[ccp4bb] Renumbering of water molecules during deposition

how to treat these? One way to deal with this is would be to use an arbitrary offset: A1-A233 protein A301 ligand A302 another ligand A401-404 4 special waters A500- general solvent Any input welcome ;-) All the best, Eckhard -- Prof. Dr. Eckhard Hofmann eckhard.hofm...@bph.ruhr-uni-bochum.de Ruhr

[ccp4bb] Simple swingout centrifuge for screening plates?

centrifuges from Eppendorf etc. are somewhat oversized. Any ideas on this topic? Thanks for hints, Eckhard -- Eckhard Hofmann eckhard.hofm...@bph.ruhr-uni-bochum.de Ruhr-Uni Bochum AG Proteinkristallographie, LS Biophysik, ND04/318 44780 Bochum Tel: +49-(0)234/32-24463, Sekr. -24461, FAX: -14762

[ccp4bb] Torsion restraints in refmac

and not inputting them separately. Anything I overlook here? Any additional keyword I overlooked? Thanks for any input! Cheers, Eckhard PS: Using refmac_5.2.0019 with ccp4i 1.4.4.2 -- Eckhard Hofmann [EMAIL PROTECTED] Ruhr-Uni Bochum AG Proteinkristallographie, LS Biophysik, ND04/316 44780 Bochum

[ccp4bb] Summary torsion restraints in refmac

will be dealt with soon by Garib. Eckhard -- Eckhard Hofmann [EMAIL PROTECTED] Ruhr-Uni Bochum AG Proteinkristallographie, LS Biophysik, ND04/316 44780 Bochum Tel: +49-(0)234/32-24463, Sekr. -24461, FAX: -14762

Re: [ccp4bb] Refmac and planar amide restraint

-standard parts and Refmac accepts these and makes the bonds between the various monomers in the ligand but treats them as single bonds and therefore fully rotatable. Cheers. Jason -- Eckhard Hofmann [EMAIL PROTECTED] Ruhr-Uni Bochum AG Proteinkristallographie, LS Biophysik, ND04/316 44780 Bochum

[ccp4bb] Stereo with Nvidia Quadro FX570

a card with emitter-output, but it always nags me if it should be possible to get it to work ... Thanks for any hints, Eckhard -- Jun.-Prof. Dr. Eckhard Hofmann [EMAIL PROTECTED] Ruhr-Uni Bochum AG Proteinkristallographie, LS Biophysik, ND04/316 44780 Bochum Tel: +49-(0)234/32-24463, Sekr. -24461

Re: [ccp4bb] tortion angle restraints in REFMAC

angles, period 1 through 4. 3. In REFMAC gui under Geometric parameters, there is only one user controlled weight for torsion. By changing the weight here, does it change the torsion weight for all 4 periods? Thanks in advance for the help. Huiying -- Eckhard Hofmann [EMAIL PROTECTED] Ruhr

Re: [ccp4bb] Secondary structure restraints

that someone must have done this Phil -- Eckhard Hofmann eckhard.hofm...@bph.ruhr-uni-bochum.de Ruhr-Uni Bochum AG Proteinkristallographie, LS Biophysik, ND04/316 44780 Bochum Tel: +49-(0)234/32-24463, Sekr. -24461, FAX: -14762

Re: [ccp4bb] Secondary structure restraints: Oops

a hydrogen-bond or secondary structure assignment program. Helices are reasonably straightforward (I can see how to do them from eg DSSP), but sheets are more complicated. Any suggestions? I'm sure that someone must have done this Phil -- Eckhard Hofmann eckhard.hofm...@bph.ruhr-uni-bochum.de Ruhr

[ccp4bb] Open PhD positions in Microbial Substrate Conversion (MiCon)

, Esselborn J, Wittkamp F, Hofmann E, Apfel U-P, Stripp ST, Happe T. 2017. Accumulating the hydride state in the catalytic cycle of [FeFe]-hydrogenases. Nature Communications 8:16115. -- Prof. Dr. Eckhard Hofmann <eckhard.hofm...@bph.ruhr-uni-bochum.de> Ruhr-Uni Bochum AG Proteinkristallog

Re: [ccp4bb] Purchasing slides with diffraction gratings for teaching diffraction

2297237 To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB=1 -- Eckhard Hofmann Ruhr-Uni Bochum AG Proteinkristallographie, LS Biophysik, ND04/318

[ccp4bb] Opening for Postdoctoral Fellow / Habilitant in Structural Biology at Ruhr-University Bochum

, Lisa Scholtysek, Oliver Lampret, Jan Jaenecke, Ulf-Peter Apfel, Gianfranco Valetti, Vincent Fourmond, Eckhard Hofmann, Christophe Leger, Thomas Happe 2021. „A Safety Cap Protects Hydrogenase from Oxygen Attack“ Nature Communications 12 (1): 756. https://doi.org/10.1038/s41467-020-20861-2

[ccp4bb] Open PhD-position on structural biology of hydrogenases, Bochum, Germany

if you have further questions, all the best, Eckhard -- Prof. Dr. Eckhard Hofmann Ruhr-University Bochum AG Proteinkristallographie ND04/318, Fachnummer 50 44780 Bochum Tel: +49-(0)234/32-24463, Sekr. -24461, FAX: -14762 ORCID: -0003-4874-372X www.bioxtal.rub.de

[ccp4bb] 12 open PhD positions in the area of microbial substrate conversion, Ruhr University Bochum, Germany

-- Prof. Dr. Eckhard Hofmann Ruhr-Uni Bochum AG Proteinkristallographie ND04/318, Fachnummer 50 44780 Bochum Tel: +49-(0)234/32-24463, Sekr. -24461, FAX: -14762 ORCID: -0003-4874-372X -- Eckhard Hofmann Ruhr-Uni Bochum AG Proteinkristallographie ND04/318, Fachnummer 50 44780 Bochum Tel: +49-(0

[ccp4bb] Opening for Postdoctoral Fellow / Habilitant in Structural Biology at Ruhr University Bochum, Germany

-20861-2. Sommerkamp, J. A.; Frankenberg-Dinkel, N.; Hofmann, E. Crystal Structure of the First Eukaryotic Bilin Reductase GtPEBB Reveals a Flipped Binding Mode of Dihydrobiliverdin. J. Biol. Chem. 2019, 294 (38), 13889–13901. https://doi.org/10.1074/jbc.RA119.009306. -- Eckhard Hofmann Ruhr-Uni

[ccp4bb] Open PhD positions in graduate school on microbial substrate conversion

structural biology plays a role. Deadline 21.1.2024. All the best, Eckhard -- Prof. Dr. Eckhard Hofmann Ruhr-Uni Bochum AG Proteinkristallographie ND04/318, Fachnummer 50 44780 Bochum Tel: +49-(0)234/32-24463, Sekr. -24461, FAX: -14762 ORCID: -0003-4874-372X