Re: [ccp4bb] biological molecule?

[Carter, Charlie]

Many thanks Joel and others.

There is a download button that is so obvious but has no options; I never 
explored the new layout of the menu bar. 

Charlie
> On Apr 9, 2018, at 5:59 PM, Joel Tyndall <joel.tynd...@otago.ac.nz> wrote:
> 
> Hi Charlie,
> 
> I just visited the RCSB PDB website and looked up a random structure. You can 
> still download the biological unit in pdb format from the download files 
> pulldown
> 
> J
> 
> -Original Message-
> From: CCP4 bulletin board <CCP4BB@JISCMAIL.AC.UK> On Behalf Of Carter, Charlie
> Sent: Tuesday, 10 April 2018 9:56 AM
> To: CCP4BB@JISCMAIL.AC.UK
> Subject: [ccp4bb] biological molecule?
> 
> I knew this would happen one day. I loathed the cif versions of the 
> coordinates, but fortunately, I’ve never had to use a .cif file. 
> 
> Now, the pdb no longer offers anything but…
> 
> I cannot find in the .cif file where the instructions are to generate the 
> biological molecule from the asymmetric unit. How does one do this please?
> 
> Thanks,
> 
> Charlie

Re: [ccp4bb] biological molecule?

[Jose Duarte]

Dear Charlie

There's good documentation here:

https://pdb101.rcsb.org/learn/guide-to-understanding-pdb-data/biological-assemblies

Hope it helps

Jose



On Mon, Apr 9, 2018 at 2:55 PM, Carter, Charlie  wrote:

> I knew this would happen one day. I loathed the cif versions of the
> coordinates, but fortunately, I’ve never had to use a .cif file.
>
> Now, the pdb no longer offers anything but…
>
> I cannot find in the .cif file where the instructions are to generate the
> biological molecule from the asymmetric unit. How does one do this please?
>
> Thanks,
>
> Charlie

Re: [ccp4bb] biological molecule?

[Joel Tyndall]

Hi Charlie,

I just visited the RCSB PDB website and looked up a random structure. You can 
still download the biological unit in pdb format from the download files 
pulldown

J

-Original Message-
From: CCP4 bulletin board <CCP4BB@JISCMAIL.AC.UK> On Behalf Of Carter, Charlie
Sent: Tuesday, 10 April 2018 9:56 AM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] biological molecule?

I knew this would happen one day. I loathed the cif versions of the 
coordinates, but fortunately, I’ve never had to use a .cif file. 

Now, the pdb no longer offers anything but…

I cannot find in the .cif file where the instructions are to generate the 
biological molecule from the asymmetric unit. How does one do this please?

Thanks,

Charlie

[ccp4bb] biological molecule?

[Carter, Charlie]

I knew this would happen one day. I loathed the cif versions of the 
coordinates, but fortunately, I’ve never had to use a .cif file. 

Now, the pdb no longer offers anything but…

I cannot find in the .cif file where the instructions are to generate the 
biological molecule from the asymmetric unit. How does one do this please?

Thanks,

Charlie