Link statement?
LINK NZ LYS A 72 C4A PLP A 500 1555 1555
1.30
There are many examples in the PDB this one 1hkv
Best, BR
From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of Rajesh
Kumar
Sent: Monday, July 23, 2012 10:30 AM
To:
Dear Rajesh
tutorial on this website is designed exactly for PLP-LYS links
http://www.ysbl.york.ac.uk/mxstat/JLigand/index.html
regards
Garib
On 23 Jul 2012, at 18:30, Rajesh Kumar wrote:
Dear All,
My friend needs a help.
What is the best way to connect Lys to PLP with covalent bond.
Dear Rajesh,
You do not need to define a link between Lys and PLP: PLP linked to Lys
is LLP. You can find examples in PDB. LLP is recognized by Phenix and
Refmac.
Kind regards,
David
On 07/23/2012 07:30 PM, Rajesh Kumar wrote:
Dear All,
My friend needs a help.
What is the best way to connect
Dear Rajesh,
We found that LLP has a single bond between C4' and Nz which is not
correct for internal aldimine form of PLP. Please use IT1 from RCSB.
IT1 also has similarly linked PLP and Lys with the correct double bond.
For some other PLP schiff base complexes there are multiple entries in
