Re: [cellml-discussion] Java error on Mac OSX10.8.2

2013-02-27 Thread Mark Cannell
On 26/02/2013, at 9:43 PM, Andrew Miller ak.mil...@auckland.ac.nz wrote: On 27/02/13 10:09, Mark Cannell wrote: Hi Randall I installed the tools and the repository code does runs in OpenCell. However when I clone the distribution and edit anything I get the same java error I got before

Re: [cellml-discussion] Java error on Mac OSX10.8.2

2013-02-27 Thread Randall Britten
Hi Mark If you send a bit more detail about the model structure change, perhaps we can solve it. Regards, Randall On 27/02/13 9:32 PM, Mark Cannell mark.cann...@bristol.ac.uk wrote: On 26/02/2013, at 9:43 PM, Andrew Miller ak.mil...@auckland.ac.nz wrote: On 27/02/13 10:09, Mark Cannell

Re: [cellml-discussion] Java error on Mac OSX10.8.2

2013-02-26 Thread Mark Cannell
Hi Peter This tool looks great. I can't save any edits tho', and in the simulation widow if I change a parameter the change is lost when I run the simulation. Is there a work around beyond editing the file externally and reloading? Cheers Mark On 26/02/2013, at 3:35 AM, Peter Hunter

Re: [cellml-discussion] Java error on Mac OSX10.8.2

2013-02-26 Thread Alan Garny
Dear Mark, This tool looks great. I can't save any edits tho', This is correct, OpenCOR can't currently save edits. I am hoping to have the editing of CellML file in OpenCOR within the next few weeks. However, it will initially be possible to do so by editing the CellML file directly. This is

Re: [cellml-discussion] Java error on Mac OSX10.8.2

2013-02-26 Thread Randall Britten
Hi Mark I use Mac OS X 10.8.2. OpenCell v0.8 runs fine, as far as I can tell. As Andre said, you need to install Xcode and the Xcode command line tools (they are free from the Apple App store). (This is all just an interim measure until the imminent release of OpenCOR. Development and

Re: [cellml-discussion] Java error on Mac OSX10.8.2

2013-02-26 Thread Andrew Miller
On 27/02/13 10:09, Mark Cannell wrote: Hi Randall I installed the tools and the repository code does runs in OpenCell. However when I clone the distribution and edit anything I get the same java error I got before the Xcode tools were installed. I have no idea what I could be doing wrong..

Re: [cellml-discussion] Java error on Mac OSX10.8.2

2013-02-25 Thread Peter Hunter
Hi Mark, FYI, there is a new CellML simulation tool called OpenCOR being developed by Alan Garny that is becoming our primary platform for CellML-based modelling (see http://www.cellml.org/getting-started/tutorials/opencordemo for download instructions). This will shortly have CellML

Re: [cellml-discussion] Java error on Mac OSX10.8.2

2013-02-25 Thread Mark Cannell
Hi All, Peter Could not seem to get OpenCell to run but OpenCor works and looks like a great tool. I look forward to version 1.0 and will see how 0.0 runs in the meantime, Thanks, Mark On 26/02/2013, at 3:35 AM, Peter Hunter p.hun...@auckland.ac.nz wrote: Hi Mark, FYI, there is a new