Maxwell Neal wrote:
Hi all - I was wondering - is there a webservice that would allow me
to programmatically download all the cellml models in the cellml
repository? Many thank,
Hi Maxwell,
Thank you for your interest in the CellML Model Repository. While we currently
don't have a formalized web service, we do provide a list of IDs to the
workspaces (http://models.cellml.org/workspace) which can be found at
http://models.cellml.org/workspace/list_txt. Basically you can append the ids
listed with the path.
To acquire the models, we recommend the usage of a Mercurial client, which can
be acquired from http://mercurial.selenic.com/. You can then use some kind of
shell scripting to loop through that list and clone each workspace onto your
local machine.
This is an example shell script:
#!/bin/sh
WS_ROOT=https://models.cellml.org/workspace
LIST=list_txt
for WORKSPACE in `wget --no-check-certificate -q -O - $WS_ROOT/$LIST`; do
if [ -d $WORKSPACE ]; then
echo $WORKSPACE exists. Checking updates.
hg pull -R $WORKSPACE
hg up -R $WORKSPACE -C
else
echo $WORKSPACE does not exist. Cloning.
hg clone $WS_ROOT/$WORKSPACE
fi
done
Note this script will overwrite any local uncommitted changes.
Regards,
Tommy.
M
--------------------------------- Maxwell Neal
Post-doctoral researcher University of Washington mn...@uw.edu (206)
543-8769 ---------------------------------
On Jul 29, 2011, at 5:00 PM, cellml-discussion-requ...@cellml.org
wrote:
Send cellml-discussion mailing list submissions to
cellml-discussion@cellml.org
To subscribe or unsubscribe via the World Wide Web, visit
http://lists.cellml.org/mailman/listinfo/cellml-discussion or, via
email, send a message with subject or body 'help' to
cellml-discussion-requ...@cellml.org
You can reach the person managing the list at
cellml-discussion-ow...@cellml.org
When replying, please edit your Subject line so it is more specific
than "Re: Contents of cellml-discussion digest..."
Today's Topics:
1. ABI CellML Meeting Minutes, 27th July, 2011 (Dougal Cowan)
----------------------------------------------------------------------
Message: 1 Date: Fri, 29 Jul 2011 13:56:13 +1200 From: Dougal Cowan
<dj.co...@auckland.ac.nz> Subject: [cellml-discussion] ABI CellML
Meeting Minutes, 27th July, 2011 To: CellML Discussion List
<cellml-discussion@cellml.org> Message-ID:
<4e32133d.4080...@auckland.ac.nz> Content-Type: text/plain;
charset=ISO-8859-1; format=flowed
I have put the minutes from this week's meeting up at:
http://www.cellml.org/community/meeting/minutes/2011/07.27
Cheers, Dougal
------------------------------
_______________________________________________ cellml-discussion
mailing list cellml-discussion@cellml.org
http://lists.cellml.org/mailman/listinfo/cellml-discussion
End of cellml-discussion Digest, Vol 84, Issue 10
*************************************************
_______________________________________________ cellml-discussion
mailing list cellml-discussion@cellml.org
http://lists.cellml.org/mailman/listinfo/cellml-discussion
_______________________________________________
cellml-discussion mailing list
cellml-discussion@cellml.org
http://lists.cellml.org/mailman/listinfo/cellml-discussion
