Some of you might be interested in this--JSim now has CellML output as well as CellML input. Since JSim models themselves are not modular, everything gets put into a single component; there is hope that in the future when JSim itself is modular, it will be able to produce modular CellML output. A few more details at
http://physiome.org/jsim/docs/MML_CellML.html#exporting -Lucian ----- Forwarded message from Erik Butterworth <butt...@bioeng.washington.edu> ----- From: Erik Butterworth <butt...@bioeng.washington.edu> Reply-To: Erik B <butt...@u.washington.edu> To: JSim Development -- Adam Alessio <aales...@u.washington.edu>, "Dr. James Caldwell" <jc...@u.washington.edu>, Forbes Dewey <cfde...@mit.edu>, "Huhns, Michael" <hu...@engr.sc.edu>, Melissa Krueger <krue...@u.washington.edu>, Max Neal <mn...@u.washington.edu>, David Nickerson <d.nicker...@auckland.ac.nz>, Bart Jardine <bar...@u.washington.edu>, Gary Raymond <ga...@u.washington.edu>, "Dr. James Bassingthwaighte" <j...@u.washington.edu>, Lucian Smith <lpsm...@u.washington.edu>, Rebecca Rowe <rebika...@gmail.com>, "Dash, Ranjan" <rd...@mcw.edu>, Richard Ward <ward...@ornl.gov>, Herb Sauro <hsa...@u.washington.edu>, Andreas Schwab <andreas.sch...@staff.mcgill.ca>, Shiva Ayyadurai <vash...@mit.edu>, Gary Ynvge <gyn...@cs.washington.edu>, Adam Alessio <aales...@u.washington.edu> Subject: JSim 2.06 released Date: Thu, 2 Feb 2012 10:01:48 -0800 (PST) Message-ID: <pine.lnx.4.64.1202020955210.4...@frodo.bioeng.washington.edu> Highlights: o new Monte-Carlo analysis module; o CellML output is now available; o various bug fixes, including one in SBML import which previously mishandled time-varying compartment volumes. See the JSim home page for complete information on JSim, including documentation, downloads, documentation and model repositories: http://physiome.org/jsim/ For complete details on the latest release, click on "What's New?" Note to QPP users: JSim 2.06 should not be used with the previous QPP release (0.913). A new QPP release, 0.914, will be made later today that is compatible with JSim 2.06. Erik Butterworth butt...@uw.edu 206-685-2007 Software Engineer, University of Washington Bioengineering http://physiome.org/~butterw/ ----- End forwarded message ----- _______________________________________________ cellml-discussion mailing list cellml-discussion@cellml.org http://lists.cellml.org/mailman/listinfo/cellml-discussion
