[CentOS] gcc 4.1 and OpenMP?

2009-01-12 Thread Davide Cittaro
libgomp.so, installed with gcc 4.1 from CentOS rpms... Is CentOS default compiler OpenMP ready? Does this mean I don't have to compile my own compiler? Thanks d Davide Cittaro davide.citt...@ifom-ieo-campus.it ___ CentOS mail

Re: [CentOS] ZFS on Linux

2008-12-28 Thread Davide Cittaro
On Dec 29, 2008, at 7:09 AM, John R Pierce wrote: > Bill Campbell wrote: >> I would go with Opensolaris. > > > for a dedicated production storage server, I would go with Solaris 10. > unless there's some specific feature/capability you need thats only in > OpenSolaris. Totally agree. Solaris 10

Re: [CentOS] ZFS on Linux

2008-12-28 Thread Davide Cittaro
least not 2 months ago...). Check this http://opensolaris.org/os/community/brandz/ d Davide Cittaro davide.citt...@ifom-ieo-campus.it ___ CentOS mailing list CentOS@centos.org http://lists.centos.org/mailman/listinfo/centos

Re: [CentOS] ZFS on Linux

2008-12-28 Thread Davide Cittaro
! If you don't want Solaris, you can use FreeBSD 7 which supports native ZFS. d Davide Cittaro davide.citt...@ifom-ieo-campus.it ___ CentOS mailing list CentOS@centos.org http://lists.centos.org/mailman/listinfo/centos

Re: [CentOS] nfs slow?

2008-12-16 Thread Davide Cittaro
plus kernel... As new CentOS user I've trusted yum... Tomorrow I will try the standard one (not now, I don't like rebooting servers from home ^__^) d Davide Cittaro davide.citt...@ifom-ieo-campus.it ___ CentOS mailing list CentOS@

Re: [CentOS] nfs slow?

2008-12-16 Thread Davide Cittaro
were changes and breakage somewhere after that.. ) I normally try a set of comparisons: Great! I'm 2.6.18-92.1.18.el5.centos.plus! I don't se 2.6.20 in yum updates... is there any unstable repository I should enable? d Davide Cittaro davide.citt...@ifom-ieo

Re: [CentOS] nfs slow?

2008-12-16 Thread Davide Cittaro
well, it is not a good thing :-) d Davide Cittaro davide.citt...@ifom-ieo-campus.it ___ CentOS mailing list CentOS@centos.org http://lists.centos.org/mailman/listinfo/centos

Re: [CentOS] nfs slow?

2008-12-16 Thread Davide Cittaro
D rw ,vers =3,rsize=32768,wsize=32768,hard,proto=tcp,timeo=600,retrans=2,sec=sys (options are results of nfsstat -m). I have ~74 MB/s on Gentoo and 52 MB/s on CentOS... I've tried many wsize/rsize, a bunch of different mount options, but still I can't outperform those values... d

Re: [CentOS] init script question

2008-12-12 Thread Davide Cittaro
Ok, another one: the process I would like to start is not a daemon itself. If I start it with "daemon" function it remains in foreground. Ok, I can play with '&' but is there a init function to start in background a process? d /* Davide Cittaro Cogentech

Re: [CentOS] init script question

2008-12-12 Thread Davide Cittaro
On Dec 12, 2008, at 2:40 PM, Jacques B. wrote: > Do you mean like $0? That gives you the current script name. :-) Fine, thanks, I thought that launching with /sbin/service somehow breaks positional variables... d /* Davide Cittaro Cogentech - Consortium for Genomic Technologies

[CentOS] init script question

2008-12-12 Thread Davide Cittaro
Hi all, is there a function (or variable) I can use in a custom init script that identifies the init script name? i.e. I'm porting some init scripts from gentoo, where the $SVCNAME variable identifies the init script name within the script itself... d /* Davide Cittaro Coge

Re: [CentOS] nfs slow?

2008-12-10 Thread Davide Cittaro
for NFS > over TCP in a long-haul type environment, but would run it over UDP > otherwise. > > -John > ___ > CentOS mailing list > CentOS@centos.org > http://lists.centos.org/mailman/l

Re: [CentOS] nfs slow?

2008-12-10 Thread Davide Cittaro
bandwidth limit) I guess Solaris is not the issue... Thanks d Davide Cittaro [EMAIL PROTECTED] ___ CentOS mailing list CentOS@centos.org http://lists.centos.org/mailman/listinfo/centos

[CentOS] nfs slow?

2008-12-10 Thread Davide Cittaro
bot x86_64)... It happens that centos is 5-10 times slower either in read and write operations... Ok, I'll try to tune rsize and wsize, but does anybody have an hint on this low performance? Thanks d Davide Cittaro [EMAIL PROTECTED] ___ Cent

[CentOS] isw_xxxxxxxx missing?

2008-11-28 Thread Davide Cittaro
Hi all, I've installed CentOS 5.2 on a sun x2250. The installer goes fine and I can setup my root with lvm on /dev/ mapper/isw__Volume0, that is the hardware RAID1 for two disks available. As the system boots lvm complains of a duplicate PV and decides to use /dev/sda, so the physical

Re: [CentOS] replicate package installation on multiple machines

2008-11-26 Thread Davide Cittaro
On Nov 26, 2008, at 12:10 PM, Ralph Angenendt wrote: rpm -qa > foobar scp foobar machine2:/var/tmp ssh machine2 sudo yum install $(cat /var/tmp/foobar) Great! Thanks! d /* Davide Cittaro Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy tel.: +39

[CentOS] replicate package installation on multiple machines

2008-11-26 Thread Davide Cittaro
Hi all, Is there a way to dump the current packages installed on a machine and use it do install/uninstall packages on other machines? I've configured one at install time but to speed up other installations I would like to install default packages and then install/uninstall some starting f

Re: [CentOS] bioinformatics repository?

2008-11-25 Thread Davide Cittaro
On Nov 25, 2008, at 12:08 PM, Vandaman wrote: These look like BioRpms to me BioRPMS :- Bioinformatics RPMs Repository http://informatics.umdnj.edu/BioRPMs/ Ouch! I've missed this! thanks d /* Davide Cittaro Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 M

Re: [CentOS] bioinformatics repository?

2008-11-25 Thread Davide Cittaro
ve to download .deb packages and resolve dependencies on my own? Thanks again d /* Davide Cittaro Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy tel.: +39(02)574303007 e-mail: [EMAIL PROTECTED] */ ___ CentOS ma

Re: [CentOS] bioinformatics repository?

2008-11-25 Thread Davide Cittaro
;ve seen people adding this repo.bioinformatics.upenn.edu and others but they seem to be seldom updated... d /* Davide Cittaro Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy tel.: +39(02)574303007 e-mail: [

[CentOS] bioinformatics repository?

2008-11-25 Thread Davide Cittaro
find a valuable solution: which is (or which are) the best repository I should add to have a satisfying list of bioinfo rpm? Thanks d /* Davide Cittaro Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy tel.: +39(02)574303007 e-mail: [